| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3748 |
|---|
| Symbol | |
|---|
| ID | 5196600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 4110186 |
|---|
| End bp | 4110452 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640583303 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_001264231 |
|---|
| Protein GI | 148556649 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGCGT CCTATCAGGG TCAGCTCTGG GCACGAATTT CAGCGCGCAA GCCCAGGGGG
CTAAACCTGT CCGGCGTCGC CATGGTGCGC TTTGCCGTCG GTCGTGCCGG CGAACTGATT
TCCGTCGAGC TTGCGGCATC CAGCGGAAAC GCGGCGCTGG ATCGTTTAGC GCTCCGGACG
GTCCGCAATG CTGGTCCCTT TCCACCGCCT CCCGCGACGG TGGAAGGGGA CCAGCTCGTC
TTCACGATCC CCTTCAGCTT TCATTGA
|
|---|
| Protein sequence | MLASYQGQLW ARISARKPRG LNLSGVAMVR FAVGRAGELI SVELAASSGN AALDRLALRT
VRNAGPFPPP PATVEGDQLV FTIPFSFH
|
|---|
| |