Gene Swit_3745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3745 
Symbol 
ID5199462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4108238 
End bp4109026 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content67% 
IMG OID640583300 
Producthypothetical protein 
Protein accessionYP_001264228 
Protein GI148556646 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG AACCTGTCCA ATATCTGCTC GGAGCCGGAT CGGGTTCGCT CGTCGGCTTC 
ACGCTCGGCC TCGTGGGGGG CGGCGGGTCG ATCCTCGCCG TCCCCCTCAT GGTCTATCTC
GTCGGCGTCG CCTCGCCCCA TGTCGCGATC GGCACCAGCG CGCTCGCGGT TGCCGCCAAT
GCCGGCGCCA ATCTCGTTCC CCATGCCCGT CAGCGCACGA TCAAGTGGCG CTGCGCGGGC
ATGTTCGCCG CCGCCGGCGT CGCGGGGGCC TATGCCGGAT CGACGCTCGG CAAGGCCTTC
GACGGCCAGA AGCTGCTGTT CCTGTTCGCG CTGTTGATGA TCCTGGTCGG CGCACTCATG
CTGAAGAAGC GCGGCGATCC CGGCAATCCC GATGTCCAGT GCCGCCGTGA GAACGCGCCC
AAGGTGATTG GCTATGGCAG CGCCACCGGC CTGTTCTCCG GTTTCTTCGG CATCGGCGGG
GGCTTCCTGA TCGTTCCGGG GCTGATGGCT TCGACGGGGA TGCCGATGCG CAATGCCGTC
GGATCGTCGT TGGTCGCGGT AACGGCCTTC GGTCTTACGG CCGCGCTCAA CTATGCCTTT
TCCGGGCTGG TCGATTGGGG ACTTGCCGCG GTGTTCATCG GCGGCGGCAT CGTCGGCGGT
ATCGCCGGCG CAGCACTTTC GCACCGGCTG TCGGGTCACA AGGGCGCGCT CAATACGATC
TTCGCCCTGC TGATCTTCGT GGTCGCCGCC TACATGCTGT GGCGCAGCGC GGCCGCAATC
TGGAACTGA
 
Protein sequence
MTLEPVQYLL GAGSGSLVGF TLGLVGGGGS ILAVPLMVYL VGVASPHVAI GTSALAVAAN 
AGANLVPHAR QRTIKWRCAG MFAAAGVAGA YAGSTLGKAF DGQKLLFLFA LLMILVGALM
LKKRGDPGNP DVQCRRENAP KVIGYGSATG LFSGFFGIGG GFLIVPGLMA STGMPMRNAV
GSSLVAVTAF GLTAALNYAF SGLVDWGLAA VFIGGGIVGG IAGAALSHRL SGHKGALNTI
FALLIFVVAA YMLWRSAAAI WN