Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3745 |
Symbol | |
ID | 5199462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4108238 |
End bp | 4109026 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640583300 |
Product | hypothetical protein |
Protein accession | YP_001264228 |
Protein GI | 148556646 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCTCG AACCTGTCCA ATATCTGCTC GGAGCCGGAT CGGGTTCGCT CGTCGGCTTC ACGCTCGGCC TCGTGGGGGG CGGCGGGTCG ATCCTCGCCG TCCCCCTCAT GGTCTATCTC GTCGGCGTCG CCTCGCCCCA TGTCGCGATC GGCACCAGCG CGCTCGCGGT TGCCGCCAAT GCCGGCGCCA ATCTCGTTCC CCATGCCCGT CAGCGCACGA TCAAGTGGCG CTGCGCGGGC ATGTTCGCCG CCGCCGGCGT CGCGGGGGCC TATGCCGGAT CGACGCTCGG CAAGGCCTTC GACGGCCAGA AGCTGCTGTT CCTGTTCGCG CTGTTGATGA TCCTGGTCGG CGCACTCATG CTGAAGAAGC GCGGCGATCC CGGCAATCCC GATGTCCAGT GCCGCCGTGA GAACGCGCCC AAGGTGATTG GCTATGGCAG CGCCACCGGC CTGTTCTCCG GTTTCTTCGG CATCGGCGGG GGCTTCCTGA TCGTTCCGGG GCTGATGGCT TCGACGGGGA TGCCGATGCG CAATGCCGTC GGATCGTCGT TGGTCGCGGT AACGGCCTTC GGTCTTACGG CCGCGCTCAA CTATGCCTTT TCCGGGCTGG TCGATTGGGG ACTTGCCGCG GTGTTCATCG GCGGCGGCAT CGTCGGCGGT ATCGCCGGCG CAGCACTTTC GCACCGGCTG TCGGGTCACA AGGGCGCGCT CAATACGATC TTCGCCCTGC TGATCTTCGT GGTCGCCGCC TACATGCTGT GGCGCAGCGC GGCCGCAATC TGGAACTGA
|
Protein sequence | MTLEPVQYLL GAGSGSLVGF TLGLVGGGGS ILAVPLMVYL VGVASPHVAI GTSALAVAAN AGANLVPHAR QRTIKWRCAG MFAAAGVAGA YAGSTLGKAF DGQKLLFLFA LLMILVGALM LKKRGDPGNP DVQCRRENAP KVIGYGSATG LFSGFFGIGG GFLIVPGLMA STGMPMRNAV GSSLVAVTAF GLTAALNYAF SGLVDWGLAA VFIGGGIVGG IAGAALSHRL SGHKGALNTI FALLIFVVAA YMLWRSAAAI WN
|
| |