Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3741 |
Symbol | |
ID | 5199458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4105163 |
End bp | 4105828 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640583296 |
Product | 1-Cys peroxiredoxin |
Protein accession | YP_001264224 |
Protein GI | 148556642 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATCCCA GCGCAAATGA GAGTGGCGTC TGTTCGCCGG TCCAGATCGG CGATGCCGCG CCCAATTTTC AGGCGCGCAC GACCCTGGGC GAAATGAGCC TGTCCGACTA TCGCGGCCGC TGGGTGTTGC TGTTCTCCCA CCCTGCGGAC TTCACGCCCG TCTGCACCAG TGAATTCGTC GCGCTCTCGC GCGCCGGGGA GCGGTTCAAA GCGCTCAACT GCGCGCTTGT CGCGATCTCG GTCGACAGCC TCTATTCGCA CCTCGGATGG ATACGGGCGA TCCATGAGCA TTTCGGTGTC ACGGTTGGTT TTCCGATAGT CGAAGATCCC TCGATGGTCA TCGGCCGTGC TTACGGAATG ATCGCCGACG ATGCGCCCGA CGCGGCGACG CTCCGTGCGA CCTTCTTCAT CGACCCCGAC GGCATCGTTC GCGCCAAGCT CTGCTATCCC GCCACTATTG GCCGCTCGGT AGAGGAGCTG CTGCGCGTCG TCGCCGCGCT ACAAATGGTC GACAGCGACA ATGTGGTCAC GCCCGAAGGC TGGCGCCCTG GCGATGACGT GCTGCTCCCG CCCTATCAGG ATCAGGATTC CGCGCTCGAT GCGGCAGGCG ATGCCTGCTG GTTCCACCGG ACGCGGCCCG ACAAGCACAA AAAGGCAGGC AAGTGA
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Protein sequence | MNPSANESGV CSPVQIGDAA PNFQARTTLG EMSLSDYRGR WVLLFSHPAD FTPVCTSEFV ALSRAGERFK ALNCALVAIS VDSLYSHLGW IRAIHEHFGV TVGFPIVEDP SMVIGRAYGM IADDAPDAAT LRATFFIDPD GIVRAKLCYP ATIGRSVEEL LRVVAALQMV DSDNVVTPEG WRPGDDVLLP PYQDQDSALD AAGDACWFHR TRPDKHKKAG K
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