Gene Swit_3741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3741 
Symbol 
ID5199458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4105163 
End bp4105828 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content63% 
IMG OID640583296 
Product1-Cys peroxiredoxin 
Protein accessionYP_001264224 
Protein GI148556642 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATCCCA GCGCAAATGA GAGTGGCGTC TGTTCGCCGG TCCAGATCGG CGATGCCGCG 
CCCAATTTTC AGGCGCGCAC GACCCTGGGC GAAATGAGCC TGTCCGACTA TCGCGGCCGC
TGGGTGTTGC TGTTCTCCCA CCCTGCGGAC TTCACGCCCG TCTGCACCAG TGAATTCGTC
GCGCTCTCGC GCGCCGGGGA GCGGTTCAAA GCGCTCAACT GCGCGCTTGT CGCGATCTCG
GTCGACAGCC TCTATTCGCA CCTCGGATGG ATACGGGCGA TCCATGAGCA TTTCGGTGTC
ACGGTTGGTT TTCCGATAGT CGAAGATCCC TCGATGGTCA TCGGCCGTGC TTACGGAATG
ATCGCCGACG ATGCGCCCGA CGCGGCGACG CTCCGTGCGA CCTTCTTCAT CGACCCCGAC
GGCATCGTTC GCGCCAAGCT CTGCTATCCC GCCACTATTG GCCGCTCGGT AGAGGAGCTG
CTGCGCGTCG TCGCCGCGCT ACAAATGGTC GACAGCGACA ATGTGGTCAC GCCCGAAGGC
TGGCGCCCTG GCGATGACGT GCTGCTCCCG CCCTATCAGG ATCAGGATTC CGCGCTCGAT
GCGGCAGGCG ATGCCTGCTG GTTCCACCGG ACGCGGCCCG ACAAGCACAA AAAGGCAGGC
AAGTGA
 
Protein sequence
MNPSANESGV CSPVQIGDAA PNFQARTTLG EMSLSDYRGR WVLLFSHPAD FTPVCTSEFV 
ALSRAGERFK ALNCALVAIS VDSLYSHLGW IRAIHEHFGV TVGFPIVEDP SMVIGRAYGM
IADDAPDAAT LRATFFIDPD GIVRAKLCYP ATIGRSVEEL LRVVAALQMV DSDNVVTPEG
WRPGDDVLLP PYQDQDSALD AAGDACWFHR TRPDKHKKAG K