| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3724 |
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| Symbol | |
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| ID | 5200141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4086474 |
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| End bp | 4087547 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583279 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001264207 |
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| Protein GI | 148556625 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.469854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCA GGGGCAAGTG GCTCTGGTTG GCAAGCGCCG CGTTGGCGTT ATCGGCGTGC
GGCAGTCAGC CGGAGCAGGA CGAGGCGTCG GCGACATTGC CCGCAGGCGA CATGGTGCGA
CTCGTCCCCA AGGAGATCGC GGATATGAAG GCAGTTGGTG CGGAGATCGC CACCCGCGAC
CAGGCCGAAG TCCTCGCCCG CATCCCCGGC ATATTGACCT CCCTTTCGGT GCGCGCCGGG
GATACGGTGC AGAAGGGCCA GCGCATCGGC ATGATCGTCG ACTCGCGGCT TGGCTACGAG
ACGAGCGCCT ACGGTGCGCA GGCGGCCGCC GCTCAGGCGG AAGCGGCGCG TGCCAATGCG
GACCTCGCGC GCATCCGCGA CCTCTACAAC AACGGCGTCT ATGCGAAGGC GCGTCTGGAT
CAGGCCGTCG CCGCCGCCCG CGCGGCCGAC GCGCAGGTTG CCGCAGCGCG GGCGCAGCAG
GGCGCCAGTG CCAGCGTCGC GGGGCAGGGG GCGGTGATCG CCCCGGCAAG CGGGCGTGTG
CTGCGCGCCG ATATTCCCGC AGGCGCGCCG GTCGCGCCGG GCATGTCGAT CGCGACCGTC
ACCGCAGGCC CGCCCGTCCT ACGCTTGATG CTGCCAGAAT CCGTTGCCGG ACAGATCCGA
CCCGGCGCGC GCGTGATCGT TGACGATCCA GCATTGAATG ATGGCGGACA AAATAATGCA
GGGGTGCCTT CTGGGTCGCG CCAGGGCAGC GTGACGCAGG TCTATCCTGC GATCACCGGA
GGCCAGGTTC GTGTCGATGC GACGCTGCCT GGCCTCTCAA CGCAATTCGT CGGCCGCCGC
GTGAGCGCAT CGGTCGAGAT CGGCACGCGC AAGGCACTGG TGGTGCCGCG CACATTCGTC
ACCACGCGCT ACGGGATAGA TCAGGTTCAG GTTGTGAGCG AAGGCAAGCG GCTTAGCATG
GTGCCGGTCC AGATCGCGCC GACGGCCGAC CCCGCCATGG TCGAGATCTT GAGCGGTGTG
TCTGCCGGCG ACACGTTGTT CTCCCCCGGC AAGCCCAAGG CTACGCGCCC ATGA
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| Protein sequence | MSGRGKWLWL ASAALALSAC GSQPEQDEAS ATLPAGDMVR LVPKEIADMK AVGAEIATRD
QAEVLARIPG ILTSLSVRAG DTVQKGQRIG MIVDSRLGYE TSAYGAQAAA AQAEAARANA
DLARIRDLYN NGVYAKARLD QAVAAARAAD AQVAAARAQQ GASASVAGQG AVIAPASGRV
LRADIPAGAP VAPGMSIATV TAGPPVLRLM LPESVAGQIR PGARVIVDDP ALNDGGQNNA
GVPSGSRQGS VTQVYPAITG GQVRVDATLP GLSTQFVGRR VSASVEIGTR KALVVPRTFV
TTRYGIDQVQ VVSEGKRLSM VPVQIAPTAD PAMVEILSGV SAGDTLFSPG KPKATRP
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