Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3708 |
Symbol | |
ID | 5196307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4070765 |
End bp | 4071889 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640583264 |
Product | ABC-2 type transporter |
Protein accession | YP_001264192 |
Protein GI | 148556610 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAAC ACAATAGCCA TTTCGCTTTC ACCCGGCTGC GGGCGCAGTT CATCAAGGAA GTGCTGAGCA TCCTGCGCGA CCCGCGCAGC CGCATGGTGG TGCTTGTGCC GCCGCTGTTG CAACTGCTGG TGTTCGCCTT CGCCGCGACG CTGGAAGTGC GCAATGTCGA TATCGCCGTT CACAATCAGG ATTCGGGGCG CTGGTCCTAT GAACTGATCA CGCGGCTCGA CCGGGCCGAC TTCATTACGC AGGTCTATCG CGTGAACGAC AGCCAAGAGC TGCGCGATCT TATCGACCAG GGCAAGGTGA TCGCGGCGCT CGATATCCAG CCGGACTTTT CGCGCGCAAT CGCCACCGGC GACAATGGTC GCGTTCAGAT GCTGATCGAT GGCCGGCGCA GCAATTCAGG GCAGATCACC GCTTCTTATC TCTCCGCCAT CGCTGCCGAG GTTGGCGCGG AAGCAAACGC CGGCAGTGCG CCCGCATCGG CGGTGGCGGT GCGCAACTGG TTCAATCCCA ACCTGACCTA CCGCTGGTTC ATCGTGCCCG GCCTCTCCGG TATCCTGGCG TTCTTCAGCG CGCTGCTCAT CACCTCGCTG TCGATCGCGC GGGAGCGCGA ACTGGGAACA TTCGACCAGT TGCTGGTGTC ACCAACCTCC ACGCCGGAAA TCATTATATC CAAATCCCTG CCCGCTCTGG TCATCGGCAC CATGCTCGGT CTTCTGATGA TGGCGGCCGC TGCGGGTCCG TTCCAGATTC CGTTCAACGG CTCGTTTGGG CTGCTGTTCG TCAGCCTGGT TCTGTTCATC CTGTCGGTGG TGGGCATCGG CCTGATGATA TCCGCGATCA GCGCGACCCA GCAGCAGGCC ATCCTTGGCG CCTTCGCCAT CGGCGTGCCA TCCGTTCTGA TGTCGGGCTT CGCTACCCCG GTCGAGAATA TGCCCACGCT GCTGCAATGG CTGGCTCAGG CGATCCCCCT CACCCATTTT CTGATCATCG TGGAAGGCAG CTTTCTGAAA GCAATGTCGC CCGGCGATAT TCTTGCGAGC CTTTGGCCAT TGGCGCTGAT CGCCCTGGTG TCGCTCACCA CGGCCACCAT CTTCGTTCGA GGACGTCTGC AATGA
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Protein sequence | MAQHNSHFAF TRLRAQFIKE VLSILRDPRS RMVVLVPPLL QLLVFAFAAT LEVRNVDIAV HNQDSGRWSY ELITRLDRAD FITQVYRVND SQELRDLIDQ GKVIAALDIQ PDFSRAIATG DNGRVQMLID GRRSNSGQIT ASYLSAIAAE VGAEANAGSA PASAVAVRNW FNPNLTYRWF IVPGLSGILA FFSALLITSL SIARERELGT FDQLLVSPTS TPEIIISKSL PALVIGTMLG LLMMAAAAGP FQIPFNGSFG LLFVSLVLFI LSVVGIGLMI SAISATQQQA ILGAFAIGVP SVLMSGFATP VENMPTLLQW LAQAIPLTHF LIIVEGSFLK AMSPGDILAS LWPLALIALV SLTTATIFVR GRLQ
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