Gene Swit_3707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3707 
Symbol 
ID5196306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4069625 
End bp4070758 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content63% 
IMG OID640583263 
ProductABC-2 type transporter 
Protein accessionYP_001264191 
Protein GI148556609 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGG AGGCCATGCG CCGCTTCGAC CCGAAACGCC TTTGGGCGCT GGTGGTCAAG 
GAGAGCCTGC AGGCGGTCCG CGATCCGTCC ACGCTGCTGA TCGCCTTTGT CCTTCCGGTG
GTCCTGCTGC TTCTGTTTTC CTATGCGGTG TCACTGGACG TGCGGGCAGT GCGGATCGGC
GTCGTGCAGG AATCCGAATC TGCCTCGGCG CAGTCACTGG CCGCCGCATT CGCCGGAACC
CGTTATCTGG ACGTGACTTT CGCCCATGAT CGGCGCGAGG TGTCCGACCG GGTCGTTTCG
GGCGAATTGC GCGGATTTGT AGTCATTCCG CAGGATTTCG AGCAGCGCCT GGCCGATCGC
GGCGCGCGGC CCCTCGTCCA GATCATCGCC GATGGCTCGC AGCCCAATAC CGCCAACTAT
GTCACCAACT ACGCACAGGG CGTCGTCCAG ACTTGGCGGG GCGGCCTTGG TATCGAGGCA
TCTCAGGCGG GCGTAACACT GGAGCCGCGA TACTGGTTCA ACGCCGAACT GGAGAGCCGC
CGTTCGCTCG TGCCCGGCGC CATCGCCATC GTCATGACCA TCATCGGCAC CATGTTGACC
GCACTGGTGG TAGCGCGCGA GTGGGAGCGC GGCACGATGG AGGCGGTACT CTCCACGCCC
GCATCGGTCG CGGAAATCCT GATCGGTAAG CTCCTGCCTT ATTTCGCGCT CGGGATGCTC
GCCACGCTTG GGGCCACGGC GCTGGCGGTC TTTGCGTTCG GCGTGCCGCT GCGCGGGTCA
CTGGCCGCAC TCCTTTTGCT TTCGGCGACA TTCATGGTGC CTGCGCTGGG CCAGGGACTG
CTGATCTCCT CCATCACCCG CAATCAGTTT CTGGCCGCGC AGATTGCCTT GTTCTCGGGC
TTTCTGCCCG CATTCATGCT GTCGGGCTTT CTGTATGAGA TCGACGCCAT GCCGGCGCCG
ATCCGGGCTA TCACCTGGTT TATCCCGGCG CGCTATTTCG TTTCTTCCTT GAAGACCGTG
TTTCTGGCCG GGGACATCTG GGTGGTCTTT GTGCCGAACC TGCTGGCGAT GGCTGCCATC
GGCTTTCTGT TTTTCGTCCT GGCAAAACGC GCCACGCGCA AGAATCTGGA GTGA
 
Protein sequence
MPPEAMRRFD PKRLWALVVK ESLQAVRDPS TLLIAFVLPV VLLLLFSYAV SLDVRAVRIG 
VVQESESASA QSLAAAFAGT RYLDVTFAHD RREVSDRVVS GELRGFVVIP QDFEQRLADR
GARPLVQIIA DGSQPNTANY VTNYAQGVVQ TWRGGLGIEA SQAGVTLEPR YWFNAELESR
RSLVPGAIAI VMTIIGTMLT ALVVAREWER GTMEAVLSTP ASVAEILIGK LLPYFALGML
ATLGATALAV FAFGVPLRGS LAALLLLSAT FMVPALGQGL LISSITRNQF LAAQIALFSG
FLPAFMLSGF LYEIDAMPAP IRAITWFIPA RYFVSSLKTV FLAGDIWVVF VPNLLAMAAI
GFLFFVLAKR ATRKNLE