Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3707 |
Symbol | |
ID | 5196306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4069625 |
End bp | 4070758 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640583263 |
Product | ABC-2 type transporter |
Protein accession | YP_001264191 |
Protein GI | 148556609 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCGG AGGCCATGCG CCGCTTCGAC CCGAAACGCC TTTGGGCGCT GGTGGTCAAG GAGAGCCTGC AGGCGGTCCG CGATCCGTCC ACGCTGCTGA TCGCCTTTGT CCTTCCGGTG GTCCTGCTGC TTCTGTTTTC CTATGCGGTG TCACTGGACG TGCGGGCAGT GCGGATCGGC GTCGTGCAGG AATCCGAATC TGCCTCGGCG CAGTCACTGG CCGCCGCATT CGCCGGAACC CGTTATCTGG ACGTGACTTT CGCCCATGAT CGGCGCGAGG TGTCCGACCG GGTCGTTTCG GGCGAATTGC GCGGATTTGT AGTCATTCCG CAGGATTTCG AGCAGCGCCT GGCCGATCGC GGCGCGCGGC CCCTCGTCCA GATCATCGCC GATGGCTCGC AGCCCAATAC CGCCAACTAT GTCACCAACT ACGCACAGGG CGTCGTCCAG ACTTGGCGGG GCGGCCTTGG TATCGAGGCA TCTCAGGCGG GCGTAACACT GGAGCCGCGA TACTGGTTCA ACGCCGAACT GGAGAGCCGC CGTTCGCTCG TGCCCGGCGC CATCGCCATC GTCATGACCA TCATCGGCAC CATGTTGACC GCACTGGTGG TAGCGCGCGA GTGGGAGCGC GGCACGATGG AGGCGGTACT CTCCACGCCC GCATCGGTCG CGGAAATCCT GATCGGTAAG CTCCTGCCTT ATTTCGCGCT CGGGATGCTC GCCACGCTTG GGGCCACGGC GCTGGCGGTC TTTGCGTTCG GCGTGCCGCT GCGCGGGTCA CTGGCCGCAC TCCTTTTGCT TTCGGCGACA TTCATGGTGC CTGCGCTGGG CCAGGGACTG CTGATCTCCT CCATCACCCG CAATCAGTTT CTGGCCGCGC AGATTGCCTT GTTCTCGGGC TTTCTGCCCG CATTCATGCT GTCGGGCTTT CTGTATGAGA TCGACGCCAT GCCGGCGCCG ATCCGGGCTA TCACCTGGTT TATCCCGGCG CGCTATTTCG TTTCTTCCTT GAAGACCGTG TTTCTGGCCG GGGACATCTG GGTGGTCTTT GTGCCGAACC TGCTGGCGAT GGCTGCCATC GGCTTTCTGT TTTTCGTCCT GGCAAAACGC GCCACGCGCA AGAATCTGGA GTGA
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Protein sequence | MPPEAMRRFD PKRLWALVVK ESLQAVRDPS TLLIAFVLPV VLLLLFSYAV SLDVRAVRIG VVQESESASA QSLAAAFAGT RYLDVTFAHD RREVSDRVVS GELRGFVVIP QDFEQRLADR GARPLVQIIA DGSQPNTANY VTNYAQGVVQ TWRGGLGIEA SQAGVTLEPR YWFNAELESR RSLVPGAIAI VMTIIGTMLT ALVVAREWER GTMEAVLSTP ASVAEILIGK LLPYFALGML ATLGATALAV FAFGVPLRGS LAALLLLSAT FMVPALGQGL LISSITRNQF LAAQIALFSG FLPAFMLSGF LYEIDAMPAP IRAITWFIPA RYFVSSLKTV FLAGDIWVVF VPNLLAMAAI GFLFFVLAKR ATRKNLE
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