| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3653 |
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| Symbol | |
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| ID | 5197000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4013486 |
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| End bp | 4015801 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640583208 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264137 |
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| Protein GI | 148556555 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.465269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACA GGACGACGAC GGTTTCGCTG CTTCTGGGGA TTTCCGCGAT CGCGCTGGGC
GCCGCTGCGC CGGCGGCGGC GCAGGGCACG CCCGAGGAGA CGGTGGCGAC CACGGGCGGA
GGGCTCGAGG AGATCATCGT CACCGCCCGC CGCCGCGAGG AGGCGATGCA GGACACGCCG
ATCTCGGTCA GCGCGCTGTC GAGCGCCTCG CTGGAGCGGT CGAACGTCCA GGCGCTCGAC
GACATCACCC GCCTGATGCC GAACGTGGCG ATCCAGGCGC AGTCGGGCTT CCTGGCGGGC
AACACCGCCT TCATCCGCGG CATCGGATCG CAGGAGCCGC TGCTGTCGGT CGACTCGCCG
GTCGGCATCT ACATCGACGG CGTCTATATC GGGCGCAACA ACGCCTCGAA CCTCGAACTG
GTCGACCTGG AGCGGATCGA GGTGCTGCGC GGGCCGCAGG GCACGCTGTT CGGCCGCAAC
ACCACCGGCG GCGCGATCAG CATGGTGACC AAGAAGCCGG CCAGCGAGTT CGGCGTCGAG
CAGAAGGTCA CCGTCGCCCA ATATGACGAA TATGCCGCGC GCACCCGGAT CGACACCGGC
CTGCTTGGGG AGACGGGGCT CAGCGCGACG CTGTCCTACA TGCACCGGCA GCGCGACGGC
TGGCTGAACA ACAAATATGC CAAGGGATCG CACACCCAGG GCGCGCTCAA CACCGATGCG
GTCTGGGCGA AGGTGCATGG CGAGTGGGGC GCCTTCCAGG CGGACTACAC CTTCGACTGG
ACCGACATGC GCGGCGTGCC CGGCGGTTTC CAGACGCGCT TCCTGTCGCC GCTGCTGCGG
GCCTATTATG GCAACACCAC CGGCAATTCG CTGCTCGACG AGGTGCAGCA GGATTATAAC
AAGAATTTCA GTGTCCGCTC GAAGGCGCTG CAGCGGGTCA AGATCATCGG CCATGCGCTG
ACCCTGCAAT ATGACGTCAG CGACGACATC ACGCTCAAGT CGATCACCGG CCGCCGCACC
TACAAGGCGG CGCTCGGCAC CGCCTATGCC CCGCCCGGCA TCTTCGGCAA CACCACCGCC
GGTATCCAGG AAGTGCAGAT CTACTCGGCC GACGCGAAGG ACGAGGACGT CAAGCAGTTC
TCGCAGGAGT TCCAGCTGCT CGGCAAGCTC GGTGACTTCA GCTATGTCGG CGGCCTCTAT
TATTTCGAGG AAGACAGCAA ATATTTCAAT CCGACGAGCT ATTCGTTCGT CGTCTCGCCG
ACGCTGGCGT CGAACCTGTC CTCCTCGACC ATCTTCGACT ATCAGGCGAA GTCCTACGCC
GCCTTCGGCC AGGCGAGCTG GAAGCCGCAA TCGCTCGACG AGAAGCTCGA GCTCACCTTC
GGCGTCCGCT ACACCAAGGA CAAGAAGGCG GTGCAGCAGA CCGCCAGCAC CGTCCGCAAC
GGCAAGGCCA GCTTCGACGA CACCTCGATC AACGCGATCG TCAGCTACAA GCCGGTCGAC
GACGTGATGG TCTATGCCCG CTACGGCACC GGCTATCGTT CGGGCGGCTT CAACACCCGC
GCCAGCGCCA CCCAGTCCTT CGTGTTCGAG CCGGAGAAGG CGAAGACCTA CGAGGCGGGG
ATCAAGAGCG AGTTCCTCGA TCGCCACGTC CGGCTCAACG CGGCGGTCTT CCACACCGAC
TACAAGGACC TCCAGGTCAC CCAGTATCTC GCCACCGCGG CGGGCGGCGG CGGCTTCACC
AACAACGCCT CGGCCAGGTT CCGCGGCTTC GAGGTGGAGT TGCAGGCGGT GCCGGTCGAC
GGCCTGACGC TCGACGGCAG CGTCGGCTAT GTCGATCCCA AATATAACGA GATATTCTTC
ATCGTTCCCG CGGCGCCCGT GCCCGGCCAT ACGCCGGGGG CCGGCGAGGT GGCCGGCGGC
CTCGGCAACT ATGCCGACAT CAGCAAGTTC CCCTATGTGC CGAAATGGAC GGTCCATCTG
GGCGGGCAAT ATCTGAGCGA GGATATCGGT TTCGGGAAGC TGCTGCTCAA GCTCGACTAT
TCGTACAGCA GCAAGCGCTA CTTCATGACC AACGTCCTGA ACGGGCTGAA CTTCGCCGAT
GCGATCGCCG ATCCCGGCCA GCACCAGTTC GATGCGCGTA TCGGTCTGGT CGAGGTGCCG
GTCGCCGGCA AGTCGATGGA CATCAGCCTC TTCGTCGAGA ACCTGACCAA CGAGCACAAT
ATCAGCTCGG GCATCGACTT CGGCGCGCTC GGCTTTGCCG GCAACATCTA CAGCCCGCCG
CGCCGGATCG GCGTGGACGC GAAGATCAGC TTCTGA
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| Protein sequence | MTDRTTTVSL LLGISAIALG AAAPAAAQGT PEETVATTGG GLEEIIVTAR RREEAMQDTP
ISVSALSSAS LERSNVQALD DITRLMPNVA IQAQSGFLAG NTAFIRGIGS QEPLLSVDSP
VGIYIDGVYI GRNNASNLEL VDLERIEVLR GPQGTLFGRN TTGGAISMVT KKPASEFGVE
QKVTVAQYDE YAARTRIDTG LLGETGLSAT LSYMHRQRDG WLNNKYAKGS HTQGALNTDA
VWAKVHGEWG AFQADYTFDW TDMRGVPGGF QTRFLSPLLR AYYGNTTGNS LLDEVQQDYN
KNFSVRSKAL QRVKIIGHAL TLQYDVSDDI TLKSITGRRT YKAALGTAYA PPGIFGNTTA
GIQEVQIYSA DAKDEDVKQF SQEFQLLGKL GDFSYVGGLY YFEEDSKYFN PTSYSFVVSP
TLASNLSSST IFDYQAKSYA AFGQASWKPQ SLDEKLELTF GVRYTKDKKA VQQTASTVRN
GKASFDDTSI NAIVSYKPVD DVMVYARYGT GYRSGGFNTR ASATQSFVFE PEKAKTYEAG
IKSEFLDRHV RLNAAVFHTD YKDLQVTQYL ATAAGGGGFT NNASARFRGF EVELQAVPVD
GLTLDGSVGY VDPKYNEIFF IVPAAPVPGH TPGAGEVAGG LGNYADISKF PYVPKWTVHL
GGQYLSEDIG FGKLLLKLDY SYSSKRYFMT NVLNGLNFAD AIADPGQHQF DARIGLVEVP
VAGKSMDISL FVENLTNEHN ISSGIDFGAL GFAGNIYSPP RRIGVDAKIS F
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