| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3638 |
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| Symbol | |
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| ID | 5196402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3996717 |
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| End bp | 3997514 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583193 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001264122 |
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| Protein GI | 148556540 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.593617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.680535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCCT CCGCCGGCAT GACGAAAGAG AGAAGAGGAG AGGATATGGA CAGGCTGCAG
GACAAGGCGA TCCTGATCGC CGGGGCATCC GCCAACATCG GCGCGGCGAC GGCGATCCGG
CTGGCCGGGG AGGGCGCCCG GGTGATGCTG GGCGCGCGGA GCCCCGACCG GATCGGCGCG
GTCGCCGACC AGATCAGGGC CAAGGGCGGC CAGGCCGAGA CGGTCTGCTT CGACGCCACC
GACGACGCCT CGATCGCGGC GATGGTCGCG CAGGCGGCCG ATCGCTTCGG CGGGCTCGAC
GGCATGTTCG TCAACATGGC CGAGCTGACC CTGCACAAGG TCGACACCGA CGCGGTCTCG
GTCCCGCTCG AGGTGTTCGA CAAGGCGGTG GCGGTGAACC TGCGCGGGCA CCTGCTCTGC
GCGCGCCATG CCGTGCCGCT GCTGGTCGAG CGCGGCGGCG GTTCGATCGT CTTCACCTCG
TCGAGCGCGG CCTTCATGGG GCGCGACCGG GGCATTTCCT ACACCGTCAC CAAGCATGCG
CTGACCGCGC TGATGCGCCA TGTCGCGACG ACCTGGGGCA AGCAGGGGGT GCGGTCCAAC
ATCGTCTCGC CCGGCCTCGT CCTGTCGGAG AAGAACCGCA ACCATCCCGA GATGGACAAG
GTGCTGGCGA ACACGCCCAG CCCGCGCCTC GGCGAGCCCG AGGACCTCGC CGCCGTGGTG
GCGATGCTGA TGTCGTCCGA CGGCGAATGG ATCAACGGAC AGATCCTCTG CGTCGACGGC
GGCGTGGTGA TGCGCTGA
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| Protein sequence | MPASAGMTKE RRGEDMDRLQ DKAILIAGAS ANIGAATAIR LAGEGARVML GARSPDRIGA
VADQIRAKGG QAETVCFDAT DDASIAAMVA QAADRFGGLD GMFVNMAELT LHKVDTDAVS
VPLEVFDKAV AVNLRGHLLC ARHAVPLLVE RGGGSIVFTS SSAAFMGRDR GISYTVTKHA
LTALMRHVAT TWGKQGVRSN IVSPGLVLSE KNRNHPEMDK VLANTPSPRL GEPEDLAAVV
AMLMSSDGEW INGQILCVDG GVVMR
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