Gene Swit_3630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3630 
Symbol 
ID5199400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3988547 
End bp3989695 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content71% 
IMG OID640583185 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001264114 
Protein GI148556532 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.335345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAG CCTATATCAT CGACGCCGTC CGCACCCCGG TAGGCCGCAA GAAGGGCGGA 
CTCGCCGGCG TCCACTCCGC CGATCTCGGC GGCCATGTCA TGGCCGAGCT GATGCGCCGC
ACCGGCGTCG ATCCCGGCGC GGTCGACGAC GTCGTGTTCG GCTGCTGCGA CACGATCGGC
AGCCAGGCGG GCGACATCGC GCGGAGCTGC TGGGTGGTCG CGGGCCTGCC CGAGCACGTC
CCCGGCGTGA CGATCGACCG GCAGTGCGGA TCGGCGCAGC AGGCGGTGCA CTTCGCCGCG
CAGGGGGTGA TGAGCGGCAC CCAGGACCTC GTCGTCGCGG GCGGCGTGCA GAACATGAAC
GCGATCCCGA TCTCGGCGGC GATGTGGGCG GGGCAGAGCT ACGGCTTCCC CGATCCCTTC
TCGACCTCGC CCGGCTGGAA GGCGCGCTAT GGCGACCAGG AGGTCAGCCA GTTCCGTTCG
GCCGAGATGA TCGCCGAGAA ATGGTCGATC AGCCGCGAGG ACATGGAGCA TTTCGCGCTC
GCCAGCCACC AACGCGCGAT CGACGCGCGG GCGCAGGGCC GGTTCGACCG CGAGATCGTC
GCGGTGGGCG ACGTCGCCCA TGACGAGACC CCGCGCGAGA CCTCGCTGGA GAAGATGGCG
GCGCTCGCTC CGCTGATCGA GGGCGGCCGG CTGACCGCGG CAGTGTCGAG CCAGACGGCG
GACGGCGCGG CGGCGCTGCT CGTCGCGTCG GAGCGCGCGG TCAAGGAGCA TGGGCTGAAG
CCGCGCGCGC GCATCCACCA TCTGTCGGTG CGCGCCGACG ATCCGGTGTG GATGCTGACC
GCGCCGATCC CCGCGACCCG CCACGCGTTG GCGAAGGCGG GGATGCGGAT CGAGGACATC
GACCTGTTCG AATGCAACGA GGCGTTCGCC AGCGTCGTGC TCGCCTGGAT GAAGGAGCTG
GGCATCCCGC ACGACCGGGT CAACGTCAAC GGCGGCGCGA TCGCGCTCGG CCATCCGCTC
GGCGCGACCG GCGCCCGGAT CATGACGACG ATGCTGGCCG AGCTCGAACG GCGCGGCGGG
CGCTACGCGC TCCAGACGAT GTGCGAGGGC GGCGGCCAGG CCAACGTCAC CATCCTCGAA
CGGCTCTGA
 
Protein sequence
MAEAYIIDAV RTPVGRKKGG LAGVHSADLG GHVMAELMRR TGVDPGAVDD VVFGCCDTIG 
SQAGDIARSC WVVAGLPEHV PGVTIDRQCG SAQQAVHFAA QGVMSGTQDL VVAGGVQNMN
AIPISAAMWA GQSYGFPDPF STSPGWKARY GDQEVSQFRS AEMIAEKWSI SREDMEHFAL
ASHQRAIDAR AQGRFDREIV AVGDVAHDET PRETSLEKMA ALAPLIEGGR LTAAVSSQTA
DGAAALLVAS ERAVKEHGLK PRARIHHLSV RADDPVWMLT APIPATRHAL AKAGMRIEDI
DLFECNEAFA SVVLAWMKEL GIPHDRVNVN GGAIALGHPL GATGARIMTT MLAELERRGG
RYALQTMCEG GGQANVTILE RL