| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3626 |
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| Symbol | |
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| ID | 5197877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3984543 |
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| End bp | 3985607 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640583181 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_001264110 |
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| Protein GI | 148556528 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.893392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.742507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGATC CGCTCCGGAC CGCGCTGACC GACAAGCTCG GCTGCCGCCT GCCCGTCGTC
CAGACGGCGA TGGGCTGGGT GGCCGAGCCG CCGCTGGTCG CGGCCTCGTG CGAGGCGGGG
GCGTTCGGCT TCCTCGGCGC GGCGGTGATG ACGCCCGACG AGGCGGCGGC GAAGATCGCC
GAGGTGCGGC GGCGGACGAC GCGGCCGTTC GGCGTCAACT TCCACATGTT CCAGCCGGGC
GCGGCGGCGA TCGTCGAGAC GATCATCGCC CATGCCGACC AGGTCCGCGC GGTCAGCTTC
GGGCGCGGGC CCGACGCGAA GATGATCGCC CGCTTCCGCG ACGCCGGCAT CGTCTGCATG
CCGACCGTCG GCGCGGTGAA GCATGCCCGG AAGATGGTCC AGCTCGGCTG CGACATGATC
ACGGTGCAGG GCGGCGAGGG CGGCGGCCAT ACCGGATCGG TCGCGACGAC GGTGCTGCTG
CCGCAGGTGC TCGACGCCGT GCAGGTGCCG GTGGTCGCGG CGGGCGGCTT CGGCGACGGG
CGCGGCCTGG CGGCGGCGCT CGCCTATGGC GCGGCCGGGA TCGCGATGGG CACCCGCTTC
CTGCTGACCC GCGAAAGCCC GGTGCCCGAC GCCGCCAAGG CGATCTACCT GAAGGCCGGC
ACCGACGACA TCGTCGTCAG CCGCAAGGTC GACGGCATGC CGCAGCGGAT GGTGCGCACC
CCGCTGCTCG ACCGCATCGA GCGGTCGGGG CGCATCGGCC TGTGGATGCG CGCGATCGAG
GGCGGGCTGG CGATGAAGCG CCGGACCGGC GCGTCGATCG GCGAGCTGCT GTCCGCCGCG
CGCGGCATGG CGTCGCATGG CGACGGCGGG CTGGTCGGGG CGATGATGGC CGCCGCCGCG
CCGACGCTGA TCCAGAAGGC GGTGGTCGAC GGCGACATCG ACCATGGATT GCTCGCGACC
GGCCTCGTCG CCGGCCGTAT CGACGCGCTG CCGAGCTGCG CCGAATTGCT CGACCGGATC
GAGGCCGAGG CGCGCGCGCG CCTCGCGGCG CTCGCCGGCG GCTGA
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| Protein sequence | MGDPLRTALT DKLGCRLPVV QTAMGWVAEP PLVAASCEAG AFGFLGAAVM TPDEAAAKIA
EVRRRTTRPF GVNFHMFQPG AAAIVETIIA HADQVRAVSF GRGPDAKMIA RFRDAGIVCM
PTVGAVKHAR KMVQLGCDMI TVQGGEGGGH TGSVATTVLL PQVLDAVQVP VVAAGGFGDG
RGLAAALAYG AAGIAMGTRF LLTRESPVPD AAKAIYLKAG TDDIVVSRKV DGMPQRMVRT
PLLDRIERSG RIGLWMRAIE GGLAMKRRTG ASIGELLSAA RGMASHGDGG LVGAMMAAAA
PTLIQKAVVD GDIDHGLLAT GLVAGRIDAL PSCAELLDRI EAEARARLAA LAGG
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