Gene Swit_3624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3624 
Symbol 
ID5198984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3982914 
End bp3983363 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content68% 
IMG OID640583179 
Producthypothetical protein 
Protein accessionYP_001264108 
Protein GI148556526 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.680535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACAAGC AGGGCATGGC TCCCGTCGTG GACGGCCTGT TCGCGATGGG GGATGACGGG 
CTGGCGCTGC TCGGCTCGCG CTGCACGGCG TGCGGCACCT ATTATTTCCC GAAACTGGCG
ACCTTCTGCC GCAACCCGGA TTGCGCGAGC GAAGGCTTCG AATCGGTCCG CCTGTCGCGC
ACCGGCAAGC TCTGGTCGTT CACCGACGCC TGCTACACGC CGCCCGCGCC CTATGTCGCG
GCCGATCCCT TCATCCCCTA TGCGATCGCG GCGGTCGAGC TGGAGCGCGA GCAGATGATC
GTGCTCGGCC AGGTCGTCGA CGGCGTCGGC GTCAGGGACC TGCGCGCCGG CATGGAGATG
GAACTGGTCC CCGGCACCCT GCTCGACAGC GGCGAGGCGG GGGAGAAGGC GACCTGGAAA
TGGCGTCCCA TCGCGGGAGA CGCACGATGA
 
Protein sequence
MDKQGMAPVV DGLFAMGDDG LALLGSRCTA CGTYYFPKLA TFCRNPDCAS EGFESVRLSR 
TGKLWSFTDA CYTPPAPYVA ADPFIPYAIA AVELEREQMI VLGQVVDGVG VRDLRAGMEM
ELVPGTLLDS GEAGEKATWK WRPIAGDAR