| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3623 |
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| Symbol | |
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| ID | 5198983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3981784 |
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| End bp | 3982626 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640583178 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001264107 |
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| Protein GI | 148556525 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCCG CTCCCCATTT GGGGGGTTCC GATCCCGCGC CCCGCGCCTA CTGTGCGCGG
GAAAGGGAGA GCGAAGGCGT GGCGGACAAA GGCAGGACGG CATTGATCAC GGGCGGCGGC
AAGGGGCTGG GCCGTGCGAT CAGCGAGGCG TTGCTCGCGG AGGGATGGAC GGTCGCCACC
TGCGGCCGCA GCGAGCCCGA GACGCTGCCC GAGGCCGGCG GCCGCACCGC CTTCTTCGAG
CCATGCGACG TCCGCAAGCC GGACGAGATC GCGGCGCTGG TCGACCGGGT CGTCGCCCGC
ACCGGGCGGA TCGACCTGCT CGTCAACAAT GCCGGCGGAT CGCCCCCGGT CCCCGCCGCC
GAGGCGTCGC CCCGGTTCAG CGAGGCGATC GTCGCGCTCA ACCTGCTCGG CCCGCTCCAC
ATGGCGCGCG CCTGCCATCC GGTGATGGCG CGCCAGCCCG AGGGCGGCGT GATCGTCAAC
ATCGCCAGCA TTTCGGGCAC GCGCCCGTCG CCGGGCACCG CCGCCTATGC CGCGGCCAAG
GCGGGCCTGC TCAACCTCAC CGACTCGCTG GCGATGGAAT GGGGGCCGAC GATCCGCGTC
AACGCGCTCA TCGTCGGCCT GCTCGACACC GGCGCGGCCG ACGCCGACCA TTATGGCGGG
GCCGAGGGGA TCGCCCGGAT CAACGCCTCG CTGCCGATGA AGCGGATGGC GAAGGGCTCC
GACGTCGCCG CGACCGTGAT CTTCCTCGCC TCGCCCGCCG CCGCCTATCT GAGCGGGGCG
CGGATCGCCA TCCATGGCGG CGGCGAGCGC CCCGTCTTCC TCGACCTCGC CTCCGCGTCC
TGA
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| Protein sequence | MTPAPHLGGS DPAPRAYCAR ERESEGVADK GRTALITGGG KGLGRAISEA LLAEGWTVAT
CGRSEPETLP EAGGRTAFFE PCDVRKPDEI AALVDRVVAR TGRIDLLVNN AGGSPPVPAA
EASPRFSEAI VALNLLGPLH MARACHPVMA RQPEGGVIVN IASISGTRPS PGTAAYAAAK
AGLLNLTDSL AMEWGPTIRV NALIVGLLDT GAADADHYGG AEGIARINAS LPMKRMAKGS
DVAATVIFLA SPAAAYLSGA RIAIHGGGER PVFLDLASAS
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