| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3549 |
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| Symbol | |
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| ID | 5200013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3909385 |
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| End bp | 3910611 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583104 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001264033 |
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| Protein GI | 148556451 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.348554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGAGCCA TGCGTTACCA GCTTAGCCCC GTGACCGCGC AGTTCCGCGA TGCGGGAACC
GAACGGGCGT TCCGGGCCTC GATCCTGCCC AAGGTGCAGG AGGACAGCTG GCTGACGCTG
ATCGTCGCCG CGGCGGGCAT GGCGATGTTC AGCATCTCCG ATTACGGCTT CCTCGGCCTG
TCGCCGGAAT TCTACCTGCT GCTCGGAATC CGGGCGACGC TGATCGTGAC CTGCCTGGTC
CTCGCGTTCG TGCTGCGGTC GTCGGACGCG TTGCTGACGC GGCCCTGGCT GCTCAGCGTC
GCGCCGGTGA TGATCGCCAC CGGATCGCTG TCGATGATCG TGCTGCGGCC GCATACCCTG
ACGACGCAGT TCATCGCCGT GGTGATCATC GTCATGGCCT TCTATCTCTT CTCGCCGGTC
CTGCTGTGGG GGATGATCGG CGCGAGCCTC TATCTCGGGA TCGGCTTCCT CGCCGGCGCC
TGGTATTGGG GCAGCCTGCC GTGGGACACG GTGCGCGCCT ATGGCCTGTT GCTGATCATG
GCGAACGTCG TGGGCTATGT CGTCGCCCGG CGCCTCGCCC GCCTCCAGCG CCAGCAGTTC
GAGGCGCTGA GCGAGGAGCG GCTGTCGAAG CAGCGCCTGA TGGAGGAGGT CGCGCGCCGC
GAGGCGCTGG AGACGCGGCT GCGGATCATG GCCGATACCG ACGAGCTGAC CGGCCTCGCC
AATCGGCGCT GCTTCCTCGA ACGGGCGCGG ACGGCGTTCG GCACGGCGCG GAGCCGCGAG
CGCCCGTTCA GCCTCTGCAT GATCGACGTC GACAATTTCA AGGCGATCAA CGACGGCTGG
GGCCATGACT GCGGCGACGC GGTGCTGCGC GAGGTCGCCG CGGCCTGCCT GCGGACTTTC
CGCGAGGGGG ATGCGGTCGG CCGTTTCGGC GGGGAGGAGT TCGTCGCGGC GCTGCCCGGC
GCCGACATGG CCGACGCCCG CCGGATCGCC GAACGGCTGC GCGAGACGAT CGCGGGCCTG
CGGCTCGAAG CGCCGCTCGC CGATCTGCGG GTGACCGTGA CGATCGGCCT TGCCGAGGTG
GAGCCGCTGG AAACCTCGCT CGCACCCGCC CTCAAGCGCG CCGACGCGGC CCTCTATCAG
GGCAAGCGCA GCGGGCGGAA CATGGTCCTG GACATGGATG CCGGCGGCAG CGGGCCTGGC
GAGGCCGGAG CTCAGCCGAC CGGGTAG
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| Protein sequence | MRAMRYQLSP VTAQFRDAGT ERAFRASILP KVQEDSWLTL IVAAAGMAMF SISDYGFLGL
SPEFYLLLGI RATLIVTCLV LAFVLRSSDA LLTRPWLLSV APVMIATGSL SMIVLRPHTL
TTQFIAVVII VMAFYLFSPV LLWGMIGASL YLGIGFLAGA WYWGSLPWDT VRAYGLLLIM
ANVVGYVVAR RLARLQRQQF EALSEERLSK QRLMEEVARR EALETRLRIM ADTDELTGLA
NRRCFLERAR TAFGTARSRE RPFSLCMIDV DNFKAINDGW GHDCGDAVLR EVAAACLRTF
REGDAVGRFG GEEFVAALPG ADMADARRIA ERLRETIAGL RLEAPLADLR VTVTIGLAEV
EPLETSLAPA LKRADAALYQ GKRSGRNMVL DMDAGGSGPG EAGAQPTG
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