| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3522 |
|---|
| Symbol | |
|---|
| ID | 5197159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 3878295 |
|---|
| End bp | 3878726 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640583077 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001264006 |
|---|
| Protein GI | 148556424 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.270203 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGGC CGGGGCTGGT CGCCGGCGCC GCGCAGCCGC GCGGCCGCTT CCCGCATTTC
CGCCGCGCGG GCGACTTCGT GTTCCTGTCG GGGACGAGCA GCCGCCGGCC CGACAACAGC
TTCGCGGGCG CGGAGGCCGA CGCGATGGGG GTGACGCGGG TCGACATCGC CGAGCAGACC
CGCGCGGTGA TCCTAAACAT AGAGCGGATA TTGCAGGAGG CCGGCGGAAC GCTGGCCGAC
ATCGTCGACA TCACCGCCTT CCTCGTCAAC ATGCACGACT TCGGCGGGTA CAACGCCGTC
TATGGCGAAT ATTTCTCGGA GAGCGGGCCG ACCCGGACCA CCGTCGCGGT GCACCAGCTG
CCCCATCCGC TGCTGCTGAT CGAGATGAAG GCGGTCGCCT ATATTCCGGA CCATCGGGGA
GCCAGGTCAT GA
|
|---|
| Protein sequence | MSGPGLVAGA AQPRGRFPHF RRAGDFVFLS GTSSRRPDNS FAGAEADAMG VTRVDIAEQT
RAVILNIERI LQEAGGTLAD IVDITAFLVN MHDFGGYNAV YGEYFSESGP TRTTVAVHQL
PHPLLLIEMK AVAYIPDHRG ARS
|
|---|
| |