| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3515 |
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| Symbol | |
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| ID | 5196464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3871329 |
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| End bp | 3872210 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640583070 |
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| Product | Flp pilus assembly protein CpaB-like protein |
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| Protein accession | YP_001263999 |
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| Protein GI | 148556417 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.443205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGGGA CCAGGGCCAA GATCACCGTG GTGGCTGGAC TGCTGTTCGC GCTGTTGTTC
GTCATCCTTG GCTTCCGGGA GCTTGGGCGT CCCTCCCCCT CACGCCCGCT TCCGGTGGCG
GCGATCGTGG AGAGCGGCCC CCCAGCCGCC TTCGCGATCG CCGCCCGCAG GATCGAGACC
GGCGAGACCC TCTCGCCCGA CCTCGTCCGC AACGGTCCCG CTCCCAAGGC GCTGCAGGCC
GCCACCGCCT CGCCGGCCGA AGCCGTCGGC AAGGTCGCGA CGCAGCCGAT CGCCGCCGGC
GCCGCCATCC CCCGCGCCGC GATCGCCGCC GAGGACAAGC TGGCGCTGCG CGTGCCCGTC
GGGATGCGCG CGATCAGCAT CGACACGACG TCCGAGATCG CGGTGGCCGG CCTGGTCCGT
CCCGGCGACC GCGTCGACAT CCAGGTCGTC TATCCGGGCA CCGACGCGAT CGCGGGGCTG
CGCGGGCCGG GCGGCAGCCA GGCCGCCACC CTGCTCCAGA TGGTCGAGGT GCTCGCCGTC
GGGCAGGTCG TGATCGGCAG CGGCCCGGCG AACGAGGACA AGAGCGTCTC GTCGTTCGAA
TCGCAGCCGC CCCAGGCCCG CAACGTCACG CTGGCGCTGA CGCCGGCCGA CGTCTCGACC
CTGTCGCTCG CCAAGGCGCG CGGCGCGATC TACCTGTCGC TGCGCAATCC GGCCGATCGC
GAACTGGTCG GCCGGCCGGT CGCGGCGGCG GCACCCCAGA AGGCCCAGCC CAAGCCCGCC
CCCCGCGCCG CGCGGCGGCC GAAGGCGGAA GGCCAGCAGA TCGAGCTGGT CGTGGGCGAC
CGGCGCCAGA TCATCTACTC AGGCGGGAGC GCAAGCAATT GA
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| Protein sequence | MVGTRAKITV VAGLLFALLF VILGFRELGR PSPSRPLPVA AIVESGPPAA FAIAARRIET
GETLSPDLVR NGPAPKALQA ATASPAEAVG KVATQPIAAG AAIPRAAIAA EDKLALRVPV
GMRAISIDTT SEIAVAGLVR PGDRVDIQVV YPGTDAIAGL RGPGGSQAAT LLQMVEVLAV
GQVVIGSGPA NEDKSVSSFE SQPPQARNVT LALTPADVST LSLAKARGAI YLSLRNPADR
ELVGRPVAAA APQKAQPKPA PRAARRPKAE GQQIELVVGD RRQIIYSGGS ASN
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