| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3505 |
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| Symbol | |
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| ID | 5197763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3862386 |
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| End bp | 3862799 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640583060 |
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| Product | TadE family protein |
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| Protein accession | YP_001263989 |
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| Protein GI | 148556407 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4961] Flp pilus assembly protein TadG |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.124271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGTTCGTC TGGGAAACAA GGGCGCCGCG GCGATCGAAT TCGCATTGAT CGCCCCGGCG
CTCATCATGC TGATGTTCGC GATCCTGGTC TATTCGACCT ATTTCGCGAC CTATATCGGG
GTACGGCAAG CCGCCGCCGA GGGCGCTCGC GCGGCGCTTG CCGGCCTCAG CACCAGCGAA
CGGACCACGC TCGCGACCGC GCGGGCGCAG CAGGTCCTCG ACCAATATGG CCTGATGCTC
TCGGCCGGCA GCCAGCCCGA CATCCGGGCC GGCGTCGGCG CGTCGGGCAG CTTCGAGGTC
AAGATCAGCT ACGACATCAG CGGCAGCCCG ATCATGCGCT ACGGCGCGCT CCTGCCGCTG
CCCAATACGA CGATCACCTC GTCGGTGATC GTCGGCAACG GAAGTTATTC GTGA
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| Protein sequence | MVRLGNKGAA AIEFALIAPA LIMLMFAILV YSTYFATYIG VRQAAAEGAR AALAGLSTSE
RTTLATARAQ QVLDQYGLML SAGSQPDIRA GVGASGSFEV KISYDISGSP IMRYGALLPL
PNTTITSSVI VGNGSYS
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