Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3491 |
Symbol | |
ID | 5199358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3839837 |
End bp | 3841159 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640583040 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001263975 |
Protein GI | 148556393 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.76367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGGC TCACCATCGG GATCGACGGC TTCAACCTCG CCATGCCGCG CGGCACCGGG GTGGCGACCT ACGGGCTGGG CCTCGCCGAA GCGGTCGCCG CGCTCGGCCA TGCGACGCTG GGCGTGTTCG GGATCGACGT CGGCGACCGG GCCGACAGCC GCGAGCTGCT GTTCTACGAC AGGATCGGCA AGGAGCGCGC GCCCGAGACG CGCAAGCAGC ACCGCCGCCG GCTGCGCCGC GAGACGTTCC GCTCCTTCCT GCCCGCCCAT GCCCATGAGG TGCCGGTCAC CGACGCGGTC GAGAAGCAGG CCTTCGCCGG CCGGCTGCCG CGCTTCGACC GGCTGGTCAG CAGCCCGGCG CTGTTCGACG TCGCCGACCG CCGCCTGCGC CGCGCCGGGA CCTTCCTGAC GCTGCGGATG CCGGACCCGC CCGCGATCAT GCACTGGACC TATCCGGTGC CGGTCCGGCT GGAGGGCGCG CGCAACGTCT ATACGCTGCA CGACCTGGTG CCGCTCAAGC TCCCCTACAC GACGCTCGAC GACAAGCGGC ATTACCGCCG GCTGATCGAG CTGTGCGTGA CGGAAGGCGA CCATGTCTGC ACGGTCTCCG AATCGAGCCG CGCCGACATA TTGGCGCTGT TCCCCGGGGT CGCGCCCGAC AAGGTGACCA ACAGCTACCA GACCGCGCCC GTCCCCGCCG ATCTGCTGGC GCGCGACCCG GCGGAAGATG CGGGCGTGGT CGAGGGGTTG TTCGGGTTGA AGCGGCGGGG ATACTTCCTG TTCTTCGGGG CGCTCGATCC CAAGAAGAAC CTCGCGCGGA TCATCGAGGC CTATCTGACC AGCCGCAGCG AGACGCCGCT CGTCATCGTC GGCGCGCGGC ATTGGGGGAC GGAGCAGGAA GCGCGGATCT TCGGGGACCA GAAGAAGGGC GTGTCGCTCT ATGGCGAGGC GGCGGCGAAG GGGCTCGTCC AGCTCGACTA TCTGCCGCGC GAGATGCTGC TGCGGCTGGT GCGCGGCGCG AAGGCGGTGA TGTTCCCGTC GCTCTACGAG GGCTTCGGCC TGCCCGCGCT GGAGGCGATC CGGCTGGGGA CGCCGGTGAT CTCCTCGACG ATCAGCTCGC TGCCCGAGGT GGTCGGCGAC GCCGGGCTGC TGGTCGATCC CTACGACGCC GGGGCGATCG CCGGGGCGAT GCGCGCGCTG GACGGGGACC CTGCGCTCGC CGCGCGGCTG TCGGCGGCGG CGCCCGCGCA GGCCGCCAGG TTCAGCGACG AGGCCTATCG CGCCCGGCTG GCGGCGATGT ACGAACGGGT CCTCTCCAAC TAG
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Protein sequence | MTRLTIGIDG FNLAMPRGTG VATYGLGLAE AVAALGHATL GVFGIDVGDR ADSRELLFYD RIGKERAPET RKQHRRRLRR ETFRSFLPAH AHEVPVTDAV EKQAFAGRLP RFDRLVSSPA LFDVADRRLR RAGTFLTLRM PDPPAIMHWT YPVPVRLEGA RNVYTLHDLV PLKLPYTTLD DKRHYRRLIE LCVTEGDHVC TVSESSRADI LALFPGVAPD KVTNSYQTAP VPADLLARDP AEDAGVVEGL FGLKRRGYFL FFGALDPKKN LARIIEAYLT SRSETPLVIV GARHWGTEQE ARIFGDQKKG VSLYGEAAAK GLVQLDYLPR EMLLRLVRGA KAVMFPSLYE GFGLPALEAI RLGTPVISST ISSLPEVVGD AGLLVDPYDA GAIAGAMRAL DGDPALAARL SAAAPAQAAR FSDEAYRARL AAMYERVLSN
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