Gene Swit_3451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3451 
Symbol 
ID5200393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3788202 
End bp3788723 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content69% 
IMG OID640582999 
ProductNUDIX hydrolase 
Protein accessionYP_001263935 
Protein GI148556353 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.824912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0807578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCG ACCCGGTCGA GATCATGTGG CAGGGCCGCT TCATCACGGC CAAGCGCGAA 
GGCAAATGGG AATATGTCGG CCGGGCGCGC AACATCCGCG CGGCGGTGAT CCTGGCGATC
GATGACGGCC ATGTCCTGCT GGTCGAGCAA TATCGCGTGC CGCTGAAGCG CGCCTGCATC
GAACTTCCCG CCGGGCTGAT CGGCGACGAG ACCGAGGGCG AGCCGGTCGA GACCGCCGCC
GCCCGCGAGC TGGAGGAGGA GACCGGCTAT CGCGCCGCGC GGATCGACGA GATCGGCGAA
TTCTCCTCCT CGCCCGGCAT GGTGTCGGAG ACCTTCACGC TGGTCCGCGC GACCGGGCTC
GAGCGGGTGC ATGACGGCGG CGGGGTCGAG GGCGAGGACA TCGTCGTCCA CCGCGTGCCC
CTCGACGGCG TCGAAGCGTT CGTCGCGGAG CAACGGGCGC TGGGCAAGAT GATCGACGTG
CGGGTGCTGC TGCTGCTCGC CGGCGGGATA ATGGCGGACT GA
 
Protein sequence
MTADPVEIMW QGRFITAKRE GKWEYVGRAR NIRAAVILAI DDGHVLLVEQ YRVPLKRACI 
ELPAGLIGDE TEGEPVETAA ARELEEETGY RAARIDEIGE FSSSPGMVSE TFTLVRATGL
ERVHDGGGVE GEDIVVHRVP LDGVEAFVAE QRALGKMIDV RVLLLLAGGI MAD