| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3446 |
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| Symbol | |
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| ID | 5200164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3781571 |
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| End bp | 3783361 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640582994 |
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| Product | ABC transporter related |
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| Protein accession | YP_001263930 |
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| Protein GI | 148556348 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.292382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTC CGATCCTCAG CTATCAGAAC CTCGGTCTCG TCCAGGGCAG CGGCTGGCTG
TTCCGCGGCC TCGACATCAA TATCGCCCCC CGCGACCGGC TGGCGCTGAT CGGCCGCAAC
GGCGCGGGCA AGACGACCCT GCTCAAGCTG CTCGCCGGCC GGATCGATTC GGACGAGGGG
CTGCGCACCA TCGTCCCCGG CACCCGCGTC GTCCTGCTCG AACAGGAGCC GTCGATGGCG
GGCCACGCCA CGCTGCGCGA TTTCGCGCTG GCCGGGTCGG ACGCCCCGCC CGCGCATGAA
GTGGAGGCGA TCGCCAGCCA GATCGGCATC GACCTGTCGC GCGACGCGGC GAGCGCGAGC
GGCGGCGAGC GGCGCCGCGC CGCGATCGCC CGCGCGCTGG CGATGGAGCC CGAGGTGCTG
CTGCTCGACG AGCCGACCAA CCATCTCGAC CTCGCCGCGA TCGAGTGGCT CGAATCCTGG
CTCGGCCGCT ATGCCGGCGC CTTCATCGCG ATCAGCCACG ATCGCACCTT CCTGACCCGG
CTGACCCGGC AGACGCTGTG GCTCGACCGG GGCGGCATCC GCCGGGCCGA GGTCGGCTTC
GGCGGGTTCG AGGCCTGGAC CGAGAAGGTC CATGAGGAGG AGGCCCGCAA CGCCGAGCGG
CTCGATGCGA AGCTGAAGAT CGAGGAGCAC TGGATGCTGC GCGGCGTCAC CGCGCGGCGG
CGGCGCAACC AGGGCCGCCT CGCCAAGCTC CACGAGATGC GGGCGCAGCG CAAGGCGATG
CTCGGGCCGC AGGGCACCGC CCGGCTCGCC GTCGCCGCCG ACGACGTCAA GACCAAGGTG
GTGATCGACG CCGAGCACGT CACCAAGGCG TTCGGGGCCG AAGAGACCTC GCGCACCATC
ATCCGGGACT TCACCTTCCG GGTGACGCGC GGCGACCGGA TCGGCGTGGT CGGCGCCAAC
GGCGCGGGCA AGTCGACCCT GCTCAAGCTG CTGACCGGCG AGATCGCGCC CGATTCGGGC
AGGGTCAAGC TCGCCAAGAC CCTCGACGGC ATCGTCATCG ACCAGCAGCG CAAGCTGATG
GCGCCCGAGA AGCGGGTGCG CGACGTGCTC GCCGACGGCG GCGACTGGAT CGAGGTGCAG
GGCGTCAAGA AGCATGTCCA CGGCTATCTC AAGGAATTCC TGTTCGAGCC GGCGATCGCC
GACGCCCGGA TCGGAACGCT GTCGGGTGGC GAGCGGTCCC GCGTCCTGCT GGCGCGCGAG
TTCGCCCGGC CCTCGAACCT GCTGGTGCTC GACGAGCCGA CCAACGACCT CGACCTCGAG
ACGCTCGACC TCTTGCAGGA GGTGATCGCC GACTATGAGG GCACCGTCCT GATCGTCAGC
CACGATCGCG ACTTCCTCGA CCGCACCGTG ACGGTGACGC TCGGCCTCGA CGGGTCGGGC
AAGGTCGACA TCGTCGCGGG CGGCTATGAG GATTGGGAAA GGCAGCGCAC CGTCCGCGTC
GAGACGAAGC GACCCGCCGC GCCCAAGGCC GAAGCTGCCG CCGCGCCCAA GGCCAGGACC
AAGCTCAGCT ACAAGGACCA GCGCGACCTC GACCTGCTCC CGGTCGAGAT CGAGAAGCTC
GAAGCCGCGA TCGCCCGTGA CGAGGCGGCG CTGGCCGACC CCGACCTCTA CGCGAAGGAC
CCGAAGCGGT TCGACGCGCT GATGAAGGGC ATCGAGGCGG CGAAGGCGAA GAAGGAGGAA
GCCGAGCTGC GCTGGCTCGA ACTCGCCGAA ATGGCCGAAA GCCTCTCTTG A
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| Protein sequence | MSAPILSYQN LGLVQGSGWL FRGLDINIAP RDRLALIGRN GAGKTTLLKL LAGRIDSDEG
LRTIVPGTRV VLLEQEPSMA GHATLRDFAL AGSDAPPAHE VEAIASQIGI DLSRDAASAS
GGERRRAAIA RALAMEPEVL LLDEPTNHLD LAAIEWLESW LGRYAGAFIA ISHDRTFLTR
LTRQTLWLDR GGIRRAEVGF GGFEAWTEKV HEEEARNAER LDAKLKIEEH WMLRGVTARR
RRNQGRLAKL HEMRAQRKAM LGPQGTARLA VAADDVKTKV VIDAEHVTKA FGAEETSRTI
IRDFTFRVTR GDRIGVVGAN GAGKSTLLKL LTGEIAPDSG RVKLAKTLDG IVIDQQRKLM
APEKRVRDVL ADGGDWIEVQ GVKKHVHGYL KEFLFEPAIA DARIGTLSGG ERSRVLLARE
FARPSNLLVL DEPTNDLDLE TLDLLQEVIA DYEGTVLIVS HDRDFLDRTV TVTLGLDGSG
KVDIVAGGYE DWERQRTVRV ETKRPAAPKA EAAAAPKART KLSYKDQRDL DLLPVEIEKL
EAAIARDEAA LADPDLYAKD PKRFDALMKG IEAAKAKKEE AELRWLELAE MAESLS
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