Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3436 |
Symbol | |
ID | 5199194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3769135 |
End bp | 3770526 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640582984 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001263920 |
Protein GI | 148556338 |
COG category | [R] General function prediction only |
COG ID | [COG3800] Predicted transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.288452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.476438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAAGC AGGGCATATT GGCGGGGCCG CGGATCAAGC GGCTGCGGCG CGACCATGGC CATACCCAGC AGGCGATGGC CGAGATGCTC GGCATCTCCG ACAGCTATCT CGCGCTGATC GAGGGCAATC GCCGGCCGCT GACCGCCGGG CTGATCCTCA AGCTCGCCGA GCTGTTCGAC TTCGACATCC GCAGCCTCAG CCAGGAGGAG CCGGGCGGCG GATCGGCGGC GATGCGGCGG CGGCTGTCCG ATCCGCTGTT CGCCGACCTG TCGATCGACC GCGCCGAACT GGAGGCGTGG ATCGACAACG CGCCCGGCGG GATCGAGGCC TTCGCCCGGC TGTTCGACCG CTGGCGGGAG GGCGGCGGCG CCGGCATGGC GGGCGAGGGC CCCAATCCGG TGATGGCGGC GCGGCGCGAG ATCGAGCGGT GGCGCAACCA TTTCGCCGAT CTCGACGCCC AGGCCGAGGA ACTGGCCGAC GAGCTGCGCA TCGGCGCGGG CGACCTCTAC GGCGCGATCG CCGAACGGCT GCGGGTCAAG CATCAGCTCA CCATCCGCAT CCTGCCGTTC GACGTGATGC CCGACCGGTT GCGCCGGCTC GACCTCCACG CCCGCCAGCT CCAGCTCTCC GAGCTGCTCG ACCCCGCCGC GCGCACCTTC CAGGCGGCGT TCCAGCTCGC CCAGATCGAG GCGCGGGCGG GGATCGACGC GCTGGTCGCC GGCGCGGCGT TCGGCGATCG CCCGGCCGAG CGGCTCTACC GCCGCCACGT CACCTCCTAT TTCGCCGCCG CGCTGATGAT GCCCTATGGC CGCTTCCTGC GCGCCTGCGA GACGACCGGC TACGACATCC AGCTGCTCCA GCGCCGCTTC GGCGCGGGGT TCGAGCAGGT CGCGCACCGG CTGACCACCT TGCAGCGGGT CGGCGCGCGC GGGCTGCCCT TCTTCATGCT GCGGATCGAC CGGGCGGGGC AATTGTCGAA GGGCTATGCC GGGGCCAGCG GCTCGGCGCT GATCGATGCG GTCCACCGCT GCCCGCTCTG GGCGATCCAC CAGGCCTTCG ACCAGCCGGG CCGGCTGATC CGCCAGCTTG CCGAACTCGA GGACGGATCG CGCTGGTTCA CCGTCGCGCG CAGCGTCCGC CACCATGGCG GCGCGGCGGG CGTGCCGGCG GCCGAGCATG TCGTCGCGCT CGGCCTCGCC GCCGACCATG CGGCGGCGCT GGCGATCGCG CGCGGGATCG ATCTCGGCGG CCCGGCCGAT CCGATCGGCC TCGGCTGCAC CCATTGCCAG CGCGCCGACT GCGTCCAGCG CGCCGCCCCC CCGCTCGGCC GCGCGCTCAC CATCAACGAA CGCGAACGCG GGCTGGCACC CTTCTCCTTC GTCGGGGATT GA
|
Protein sequence | MAKQGILAGP RIKRLRRDHG HTQQAMAEML GISDSYLALI EGNRRPLTAG LILKLAELFD FDIRSLSQEE PGGGSAAMRR RLSDPLFADL SIDRAELEAW IDNAPGGIEA FARLFDRWRE GGGAGMAGEG PNPVMAARRE IERWRNHFAD LDAQAEELAD ELRIGAGDLY GAIAERLRVK HQLTIRILPF DVMPDRLRRL DLHARQLQLS ELLDPAARTF QAAFQLAQIE ARAGIDALVA GAAFGDRPAE RLYRRHVTSY FAAALMMPYG RFLRACETTG YDIQLLQRRF GAGFEQVAHR LTTLQRVGAR GLPFFMLRID RAGQLSKGYA GASGSALIDA VHRCPLWAIH QAFDQPGRLI RQLAELEDGS RWFTVARSVR HHGGAAGVPA AEHVVALGLA ADHAAALAIA RGIDLGGPAD PIGLGCTHCQ RADCVQRAAP PLGRALTINE RERGLAPFSF VGD
|
| |