| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3431 |
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| Symbol | |
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| ID | 5198991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3764155 |
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| End bp | 3765339 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640582979 |
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| Product | patatin |
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| Protein accession | YP_001263915 |
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| Protein GI | 148556333 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.503703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTGCA GCATGACGCC CAATATGGGG GGCATGGCAG ACGCCGAACC CAGCAAGCGC
GCCGCCGCCC GGCAACGCCG GGCGGGCCTG CCGTTGCCGG ATCAGGTCGC CCTGGTGCTG
CAGGGCGGCG GCGCGCTCGG CGCCTATCAG CTCGGCGTGT TCGAGGCGCT CGACGCCGCG
CGGATCGAGA TCGACTGGGT CGCCGGCATC TCGATCGGCG CGATCAACGC CGCGATCATC
GCCGGCAACC CCTGCGAGCG GCGGCTCGAA CGGCTCCACG CCTTCTGGGA CAAGGTCACC
GAGGCGCTTC CCGCGCTCGC CTTGTTCGAC GGCGACTATG GCCGCGAGGC GCTGCACCAG
GGCGCGGCGG CGCTGGTCGC GACCTTCGGG GTGCCCGGCT TCTTCCGGCC CCGCCTGCTC
CCCCCGTTCG TCGCGCCGCC GGGCAGCGCC TCGGCGCTCA GCTTCTACGA CAGCGCCCCG
CTCGCCGACA CGCTCGACGA ACTGATCGAC TGGGACCTGC TCAACGACGG GCCGATGCGG
CTGTCGGTCG GCGCGGTCGA GCTGGAGAGC GGCAATTTCC GCTTCTTCGA CAACCGCACC
GACCGGATCG ACGCGCGCCA CGTCATGGCG TCGGGGGCGC TGCCGCCGGG CCTGCCGCCG
GTCGAGATCG ACGGCAAGCT GTGGTGGGAC GGCGGCCTCG TCTCGAACAC CCCGCTCAGC
CATGTCGTCG AGCATCAGGA CGGCGACCTG CTCGTCTTCC AGGTCGATCT CTTCCCCTCG
ACGGCGGAGC GGCCGCGCAC GATGCTCGAC GTCCTCGCGC GGGAGAAGGA GATCCGCTAT
TCGAGCCGCA CCCGCCAGAT ATCCGACCAG CTGATCCGCA TGCGCCGCGA CCAGGAACAG
GTCGCCCGCC TGCTCGACAA GCTGCCGCCG GGCATGGCCG ACGATCCCGA CGTCCAGGCG
CTGCGCGCCC GTACGCGCGC ATCGAGCCTC AGCCTCGTCC AGCTCATCTA TCGCGCCAAT
GCCTGGGAGG GCGGGTCGCG CGACTATGAA TTCTCGCAGC GGTCGATGCG CGACCATATC
GCCGCCGGCC GCGCCGCGAT CGCCGAGACC ATGACCCGGT CCGAGCTGAT CGCCCGCAAC
ATCTATGACG GCCGCACCGC CGCCTTCGAC CTGACCCACC GCTAG
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| Protein sequence | MRCSMTPNMG GMADAEPSKR AAARQRRAGL PLPDQVALVL QGGGALGAYQ LGVFEALDAA
RIEIDWVAGI SIGAINAAII AGNPCERRLE RLHAFWDKVT EALPALALFD GDYGREALHQ
GAAALVATFG VPGFFRPRLL PPFVAPPGSA SALSFYDSAP LADTLDELID WDLLNDGPMR
LSVGAVELES GNFRFFDNRT DRIDARHVMA SGALPPGLPP VEIDGKLWWD GGLVSNTPLS
HVVEHQDGDL LVFQVDLFPS TAERPRTMLD VLAREKEIRY SSRTRQISDQ LIRMRRDQEQ
VARLLDKLPP GMADDPDVQA LRARTRASSL SLVQLIYRAN AWEGGSRDYE FSQRSMRDHI
AAGRAAIAET MTRSELIARN IYDGRTAAFD LTHR
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