Gene Swit_3424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3424 
Symbol 
ID5197750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3757471 
End bp3757812 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content75% 
IMG OID640582971 
Producthypothetical protein 
Protein accessionYP_001263908 
Protein GI148556326 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.185141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.167679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTGGC CGGCGGGGGC GATCGCCCGA CGATGCGCGG CGGCCGCCCT CGCCTCGGCC 
CTGATCGGCG CGGCCCCGGC GGCGCCACGG CCCGCGACGC ACGTCATCGT CATCGACAGG
ATGAGGTTCG GCGCGGCGCC CGGCGCGCTG CGCGTCGGCG ACACGGTCAC CTGGGTCAAC
CGCGACCTGT TCCGCCACAC CGCCACCGCG CGCGACGGCC GCTTCAACCT CGACCTGATG
CCCGGCGCGA GCGCGAGCAT CGTCCTCCGC AAGACCGGGA CGGTCGCCTA TTCCTGCACC
TTCCATCCGG GCATGCGCGG CCAGCTCGTC ATCCGGGGGT GA
 
Protein sequence
MTWPAGAIAR RCAAAALASA LIGAAPAAPR PATHVIVIDR MRFGAAPGAL RVGDTVTWVN 
RDLFRHTATA RDGRFNLDLM PGASASIVLR KTGTVAYSCT FHPGMRGQLV IRG