| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3423 |
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| Symbol | |
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| ID | 5197749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3756433 |
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| End bp | 3757392 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582970 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001263907 |
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| Protein GI | 148556325 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0556291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.102163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTCA GCCATTTCGA CCTCAATCTC CTGCGGGCGC TCGACATATT GCTGACCGAG
CGCAACGTCA CCCGCGCCGC CGAGCGGCTG TGCGTGACCC AGCAGGCCGC GAGCAGCGCG
CTGCAACGGC TGCGCCACCA TTTCGACGAC GAGCTGCTGA CCAGGGTCGG CCGCCATCTG
GAGCTGACGC CGCTGGCGCG GTCGCTGATC ATGCCGGTCC GCGAGGCGCT GCTGACCGTC
CAGGCGGCGC TCGACGCGCG GCCGCATTTC GACCCGGCGA CCGCGCGCTA CAAATGCCGG
ATCGCGATGA GCGACTATTG CCTGCACGTC ATCCTGCCGC ACCTGCTCCG CTACCTGACC
ATCACCGCCC CGAACATGCA GTGCGCGGTC GAGACCCTCG GCCCCGCGAG CTTCGACCGG
CTCGAAATGG GCGAGCTCGA CTTCTGCCTG ACCGCGCACG ACATGCGGCT CTACGGGACG
CACCGGCCGA GCCGGCACAT CCGCACCATG CCCTTGTTCC GCGACGACTT CGTCTGCGTC
GCCGATCCCG CGCATGTCGA CATCGCCGAC GGCATGTCGC TGCGCACCTA CCGCCGGGCG
CGGCACAACA CGGTCGATTT CGGCGAGGAC CTGAAGACCA TCGTCGAGGA CGCCTGGGCG
AGCAGCAGCA CCGAGTTCGA CATCGCCGTG CTGGTGCCCA ATTTCGCCGC GCAGATCTTC
ATGCTGCCCG GCACCCCGCT GGTCGCCACC TCGCAGCGGC GGCTGGCCAA CACCCTGGCG
CCGCGGCTCG GGCTGGCCGT CGCCGAATGT CCGATGAAGC TGCCGCAGCT CCAGGAAATC
CTATTCTGGC ACGAGCGCAG CGAGCAGGAC CCGGCGCGCA TCTTCGTCCG CAAGGCCTTC
GGCCTGATGG TCGACCAGCT CGGCGAGGAG CCGCCGTCGA GCCACAACTC GCATTTGTGA
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| Protein sequence | MQLSHFDLNL LRALDILLTE RNVTRAAERL CVTQQAASSA LQRLRHHFDD ELLTRVGRHL
ELTPLARSLI MPVREALLTV QAALDARPHF DPATARYKCR IAMSDYCLHV ILPHLLRYLT
ITAPNMQCAV ETLGPASFDR LEMGELDFCL TAHDMRLYGT HRPSRHIRTM PLFRDDFVCV
ADPAHVDIAD GMSLRTYRRA RHNTVDFGED LKTIVEDAWA SSSTEFDIAV LVPNFAAQIF
MLPGTPLVAT SQRRLANTLA PRLGLAVAEC PMKLPQLQEI LFWHERSEQD PARIFVRKAF
GLMVDQLGEE PPSSHNSHL
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