| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3411 |
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| Symbol | |
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| ID | 5196758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3743452 |
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| End bp | 3744324 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640582958 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001263895 |
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| Protein GI | 148556313 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0444105 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCCTGC TTCGTCGCGC GGATATGCTC GTATCAAACC GAAAACAGGG TGGCAGCGGA
GAGAAGGCAT TGCTTCATCG GACGCTTCCG ATCGATAGTC CGCAAACCAG TACCGGCTGG
GAGGCGCGGC TTGCCTGCGT GATCCTGACG ATTGGCACAC CGCGCTTCAC GCATCATCTT
CACCATGCGA TTGGCAGCCT GTTGCCCACC AGCCATGTCA CCATCGTGGA ATTCTCTCCG
GCGCTCACGC CGAGCATCTT CCTGATCAGC AGCATGCGCG ACGAGGAGCG TGCAGCCCAG
TCGGCGCGGG AATATTTTGA CGAATTCTAC AAATATGACC CGAATTACTC CGCGATTGGT
GAGATCGCCC AGACCAAGGC TATGTCGATC GTCCATCCAG ATTGCAACGA TTTCAGTAAA
TTTTACAGGA ACAGATTTTT CAGCGATCAG AAAATCTCCG ATAAGTTGAC GATAATCAAT
GAGAATAATG GATCCATAAT CTCATCGAAC ATTTATAAAG ATCAAGATAA CGGCATGTTT
ACCGCTGCTG AAATCGATAA TATCACCATG CTTGCGCCGA TCATTTCCGC AGCCGTGTCA
AGGCATTGCC AGGCACTCAG CCTGGCACGT ATTGATTTGG ACATGATCAT TTATGCAATG
GCGGCGAAAC AGGCCATTTC CTTTACCGCG CGCGAGAATG ACGTATGCCG CGGCATATTG
CGTGGCCAAT CATCCGAAGC CATCGGGCTT TCGCTCGGCA TAGCCACGTC CAGCGTCATC
ACCCATCGCA AGAATCTGTA CCGCAAGCTC AACATCGTCT CGCAGGCGGA GCTTTTCTCG
CAGGCCTTCG ATGCGGTCGT CATACCTTCC TGA
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| Protein sequence | MPLLRRADML VSNRKQGGSG EKALLHRTLP IDSPQTSTGW EARLACVILT IGTPRFTHHL
HHAIGSLLPT SHVTIVEFSP ALTPSIFLIS SMRDEERAAQ SAREYFDEFY KYDPNYSAIG
EIAQTKAMSI VHPDCNDFSK FYRNRFFSDQ KISDKLTIIN ENNGSIISSN IYKDQDNGMF
TAAEIDNITM LAPIISAAVS RHCQALSLAR IDLDMIIYAM AAKQAISFTA RENDVCRGIL
RGQSSEAIGL SLGIATSSVI THRKNLYRKL NIVSQAELFS QAFDAVVIPS
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