| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3381 |
|---|
| Symbol | |
|---|
| ID | 5196579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 3710118 |
|---|
| End bp | 3711119 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640582927 |
|---|
| Product | Hpr(Ser) kinase/phosphatase |
|---|
| Protein accession | YP_001263865 |
|---|
| Protein GI | 148556283 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0479599 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCGG GGAACGCGGC GGCGGTCGCG ACGAGCGACG GTCTCGCCCG CCGCTGGACC
GGCCGGTTCG GCGGGCGCTC GATCGGGATC GAGGCCGACG CCGCGACCGC GACGCTGCTC
GCCGCCCTGC CGCTTCCGGA GCCGATCCCC GTCGCGGCGC CGGACCTGTC GATCCGTTTC
GAGAGTGGCG CGCCCGACCC GCGCGATCAG GCCGATCCCG CCTGGCGGGT GCATGACCGC
TGGGCGCGCA GCGAACAGTT GCGCGTGCGC GGCGATGGCG GGAGGCGCAT GATCTTCGAT
CCCTTCTCGC GCAGCGTCGT GTCGCTCGGC GATGGGGCGG GCCGGATCTG GTTCGATACC
GCGCAAGCCT TCGCGCCCTG GGTCGCGGCG GCGCCCGCGC TGCAACTGCT CGACTGGTGG
GGGACGCCGC GCGGGCTGCT CGCGACCCAT GGCGCGGCGG TTTCCTTCGG CGGCGCGGCG
GCGGTGTTGC TCGGGCCGGG CGGAAGCGGG AAATCGACCT TCGCGGTCGA GGCGGCCGAG
CGGGGCCATG GCTTCCTCGG CGACGATTAT GTGCTGGTCG AACCCGGTTT CGCGCCGCGC
GTCCACGCGC TCTACCGTAC CGCGAAGCTG GGTCGCGACC GGGGCGACGC GCTGCGCCGC
TTCTCCCGGC TGGCGGAGGG CGAGCCGGGC GACGACAAGG ACGTCTTCAT CGCCGCCGGC
GCCGACGTCG TCCGGTCCGC GCCGATCGTC GCGATGATCG CGCCGGTGAT CGGGGCCGGA
TCGGAACCGC GCCTGGCCCC GATCGGCCCC GCCGATCTGG TTCGCCGCGC CGCGCCGTCG
ATCCTGCGCC AGATGCCGGG CCTGGAGGCC GAGAAGCTGG CGCTGCTGTC GCGCGCCGCG
CGCGCTCTGC CCTGCTACCG GCTCGATCTC TGCCGCGATC ACGGCCGCAA CATCGGTGCC
GTCGAAACGC TGGTCGCGGC GGGAGCGGGC CCACATGGCT GA
|
|---|
| Protein sequence | MMPGNAAAVA TSDGLARRWT GRFGGRSIGI EADAATATLL AALPLPEPIP VAAPDLSIRF
ESGAPDPRDQ ADPAWRVHDR WARSEQLRVR GDGGRRMIFD PFSRSVVSLG DGAGRIWFDT
AQAFAPWVAA APALQLLDWW GTPRGLLATH GAAVSFGGAA AVLLGPGGSG KSTFAVEAAE
RGHGFLGDDY VLVEPGFAPR VHALYRTAKL GRDRGDALRR FSRLAEGEPG DDKDVFIAAG
ADVVRSAPIV AMIAPVIGAG SEPRLAPIGP ADLVRRAAPS ILRQMPGLEA EKLALLSRAA
RALPCYRLDL CRDHGRNIGA VETLVAAGAG PHG
|
|---|
| |