| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3359 |
|---|
| Symbol | |
|---|
| ID | 5199496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 3688366 |
|---|
| End bp | 3688986 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640582905 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001263843 |
|---|
| Protein GI | 148556261 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.17991 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGACG ACATTATCAA GCGCATCGAC CGACTCGAGT CGATCGATGC GATCCGCCAG
CTCGCGGCGA AGTACAGCCT CGCGCTCGAC ATGCGTGACG CCGACGCCTG GGTCGGCCTG
TTCCCCGAGG ATGTGAAGGT CGGCAATGGC GAGACCGGCC GCGCCGCGCT GCGCGCCTGG
TTCGACGACA CGATGCGGCA GCAGTTCGAC GGCACCTCGC ACCATATCGG CGGCCATATC
ATCGAGTTCG ACGATCCCGA TCATGCACAG GGCGTCGTCT ATTCCAAGAA CGAGCATGAG
ACCGGGCCCG AATGGGTGAT CATGCAGATG ATCTACGTCG ACCGCTATGA ACGGATCGAC
GGCCGCTGGT ATTTCCGCCG CCGCCTGCCG CTCTACTGGT ACGCGACCGA CCTCAACAAG
CCGCCGATCG GCGGGCGCAA GATGCGCTGG CCGGGCCGCG AGCCCTATGA GGGCGGCTAT
CACGACTATT TCCCGTCGTG GAAGCGCTTC TGGGAACGCA GCGGCCCCGA CGAGTCGCCG
GTCGCGCCGC CCGCGCCGCT GGAGAGGTTC ATCGAGACGA TGCGCGGCGG CGCCGGCGCG
CCGAAGGTGC GGGTGCGCTG A
|
|---|
| Protein sequence | MNDDIIKRID RLESIDAIRQ LAAKYSLALD MRDADAWVGL FPEDVKVGNG ETGRAALRAW
FDDTMRQQFD GTSHHIGGHI IEFDDPDHAQ GVVYSKNEHE TGPEWVIMQM IYVDRYERID
GRWYFRRRLP LYWYATDLNK PPIGGRKMRW PGREPYEGGY HDYFPSWKRF WERSGPDESP
VAPPAPLERF IETMRGGAGA PKVRVR
|
|---|
| |