Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3354 |
Symbol | |
ID | 5199236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3682357 |
End bp | 3683508 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640582900 |
Product | luciferase family protein |
Protein accession | YP_001263838 |
Protein GI | 148556256 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.698383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.734282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATTCT CGATCATCTA CGAAGCGCAG ATGGCGGACA CGTCCCCCGA ATCGGAGGTG CGCTGCTTCA ACGAGATCGT CGAGCAGGTG ATGCTCGCGG AACAGGTCGG CTTCGACAAT GTCTGGTGCG TCGAGCATAC CGCGCTGACC CAATATGCCC ATATGTCGGC GCCGGAGACG ATGCTCGCCT TCCTCGCCGG CAAGACCAGC CGGATCGGCA TCGGCCATGG CGTCGTCTGC CTGCCGCCGG CGATGAACCA TCCGGTCAAG GTGGCCGAGC GGATCGCCAC CCTCGACATA TTGTCGGGCG GGCGCGTCCA TTTCGGCATG GGCAAGGGCG GCACCCAGCA GGAGGCCGGC ACCTTCGGCT ACGACCTGGC CGAGCTGCAG CCGATGATCG ACGAGTCGAT GTACCTGATC CCCAGGATCA TGACGCAGGA CGAGATCGAG CATGACGGCA AGTACATCAA GATCCCGCGC CGGCCGATCC ATCCCAAGCC GCTGCAGACG CCGCACCCGC CGCTCTATTA TGCCTGCACC CGCGAGGCGA CGCTGGAGCT GGCCGGCAAG CGCGGCATCG GCGCGCTGGT GCTGGGCTTC TCGGGCCCCG AGGAGATCGC CCGCAAGAAC GCCGTCTATC GCGAGAATTT CCGCAACCGG AAGGCCGAGG ACCAGGTCGG CGTGGTGCCG ACCGAGCATC TCGCCGCCTT CTGCGCGGCC TGCGTGCTCG ACGACCGCGA GGAGGCGCGC CGCATCGGCC TGCGCGGCCA GCGCTTCTTT GCCGAGGCGA TCGCCCACTG GTACCAGGGT GGCCCCAAGC CGTCGACCGA CGACCTGTCG GCGGCGGAGC AGGAGGCCGC GTTGAACCAG GGCAAGGAAG CGGTCGTCGC CTATCTCTCC GAAGAGAAGA TCACGATCGG CGACGAGCAT ACCAGCAACT ATTCGGTCGC CGAGGATGCC TATGGCAATG CCGACGACTG CATCCGCTAC GTGACCCGAT TGCAGGAGGC CGGCGCCGAC GAGGTGCTGT TCCTGTTCCA GATGGGCACC GTCCCGCACG CGTCGATCCT GGAGACGATC CGCAACATCG GCACCAAGGT GATCCCGCAC TTCCGCGCCC AGGCGCAGCA GGCGGCGGTC GCCGCGGAAT GA
|
Protein sequence | MKFSIIYEAQ MADTSPESEV RCFNEIVEQV MLAEQVGFDN VWCVEHTALT QYAHMSAPET MLAFLAGKTS RIGIGHGVVC LPPAMNHPVK VAERIATLDI LSGGRVHFGM GKGGTQQEAG TFGYDLAELQ PMIDESMYLI PRIMTQDEIE HDGKYIKIPR RPIHPKPLQT PHPPLYYACT REATLELAGK RGIGALVLGF SGPEEIARKN AVYRENFRNR KAEDQVGVVP TEHLAAFCAA CVLDDREEAR RIGLRGQRFF AEAIAHWYQG GPKPSTDDLS AAEQEAALNQ GKEAVVAYLS EEKITIGDEH TSNYSVAEDA YGNADDCIRY VTRLQEAGAD EVLFLFQMGT VPHASILETI RNIGTKVIPH FRAQAQQAAV AAE
|
| |