| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3332 |
|---|
| Symbol | |
|---|
| ID | 5197637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 3661256 |
|---|
| End bp | 3661723 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640582877 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001263816 |
|---|
| Protein GI | 148556234 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00624325 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCA TCCCGCTCGA CGAGCTCGAC CAGAAGATCA TCGACCGGCT GAGCCGCGAC
GCGCGGGTCA GCAACCGGGA GATCGGCCGC GAGTTCGGCC TGACCGAGGG CACGATCCGA
TCGCGGTTGA AGCGGCTGCT CGACAACAAG GTGATCCGCG TCGCCGCCGT CACCAACGCC
AACCGGCTGA AGAACCCGTT CCTCGCCTAT CTGTGGATCG AGGCCGACAC CGCCGGCGAC
ATCCAGGCGC TGGCCGAACG GCTCGCCTCG CTGCCCGAGA TCACCTTCGT CTCGACGATG
CTCGGCCGCG CCGACGTGCT GGCGATGACG CTGGTGGAGA ATGGCAGCCA GCTCACCGAC
TTCCTCCACC AGACGATCGA CAAGATCCCC GGCGTGCGGC GGGTCCGCTA CAGCCTGGGC
CAGAACTTCA TCAAGCACGA CTTCCGCTAC TGCGCATTGG TCGATTGA
|
|---|
| Protein sequence | MTRIPLDELD QKIIDRLSRD ARVSNREIGR EFGLTEGTIR SRLKRLLDNK VIRVAAVTNA
NRLKNPFLAY LWIEADTAGD IQALAERLAS LPEITFVSTM LGRADVLAMT LVENGSQLTD
FLHQTIDKIP GVRRVRYSLG QNFIKHDFRY CALVD
|
|---|
| |