Gene Swit_3329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3329 
Symbol 
ID5197377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3659866 
End bp3660342 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content67% 
IMG OID640582874 
Producthypothetical protein 
Protein accessionYP_001263813 
Protein GI148556231 
COG category 
COG ID 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.254063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00215501 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCCTGC GGCTCGAGGA TATCGAGCTG ATCCGCCGGC TCAAATACAG CTATTCGCGC 
GCGATCGACA CCGGCGACAT GGCGACCGTC GCCGCGCTGT TCGCCGAGGA CGCGACGGTC
GACTATCGCG GCGGCAGCTA CCATGTCCGG CTGGCCGGCC GCGATGCGAT CGTCGCGGCG
CTCGCCGGCA TGTTCAACCC GCTATTCGTC GGATCGCACA CCGTCCACAT GCCGGTGATC
GACATCGTCG GCGACGACGA GGCGACCGGC ACCTGGACCC TGCTCGACTA TGCGCTGAAC
CTGGCCGAGG GCAACAAGAC CACGGTTGGC GCGGCGATCT ACCGCGATCG CTACGTCCGG
CAGGATGGCC GCTGGCTGAT CGCGCACAGC GAATATGACC GGGTCTACGA GCGGGTCTAT
GTCGATCCCG CGCCGGGCCT GACCGCGCAT TTCCTGGCGC AGCGGGGTGC TGCATGA
 
Protein sequence
MSLRLEDIEL IRRLKYSYSR AIDTGDMATV AALFAEDATV DYRGGSYHVR LAGRDAIVAA 
LAGMFNPLFV GSHTVHMPVI DIVGDDEATG TWTLLDYALN LAEGNKTTVG AAIYRDRYVR
QDGRWLIAHS EYDRVYERVY VDPAPGLTAH FLAQRGAA