Gene Swit_3328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3328 
Symbol 
ID5197376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3659366 
End bp3659869 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content68% 
IMG OID640582873 
Producthypothetical protein 
Protein accessionYP_001263812 
Protein GI148556230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.311727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00221745 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGACG CGCTGAACCT GCCCGACTAT CCGGCCGACA CTACCGTCCG GTCGGAGGTG 
GTGACGATCG ATGCCCCCGC CGCTCTGGTG TGGGAGGTGC TGACCGACCT GCCCAACTAC
GGCAAGTGGA ACCCCTTCTG CATCGGCGCG GAATCGACGC TGGAGATCGG CGATCCGATC
CACATGACGC TGGCCAACTA CACGATGCCG GGCGAGACCG CGCCCAATGT CGAATATATC
TGCGCCAAGA TCCCCGAGCG GCTGATCTCG TGGGAGCTGC TCGACAACCC CGTCTGGCCC
TATCCGGCGC GGCGCGACCA GATCATCGAG GCGACCGGCC CCGAAAGCTG CCGCTACTGG
TCGACCGACG CCTTTTTCGG GCCGAACGGC ATCCACGTCA TGCGCTTCTG CGGCCCCTGG
GTGAAGCGCG CCTTCGACGA CACCGCGCGC GGCCTGAAGG CGCGGGCCGA GGCGATCCAC
GCGGCCCGGA AGGCGGCGGC GTGA
 
Protein sequence
MTDALNLPDY PADTTVRSEV VTIDAPAALV WEVLTDLPNY GKWNPFCIGA ESTLEIGDPI 
HMTLANYTMP GETAPNVEYI CAKIPERLIS WELLDNPVWP YPARRDQIIE ATGPESCRYW
STDAFFGPNG IHVMRFCGPW VKRAFDDTAR GLKARAEAIH AARKAAA