Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3328 |
Symbol | |
ID | 5197376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3659366 |
End bp | 3659869 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640582873 |
Product | hypothetical protein |
Protein accession | YP_001263812 |
Protein GI | 148556230 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.311727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00221745 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGACG CGCTGAACCT GCCCGACTAT CCGGCCGACA CTACCGTCCG GTCGGAGGTG GTGACGATCG ATGCCCCCGC CGCTCTGGTG TGGGAGGTGC TGACCGACCT GCCCAACTAC GGCAAGTGGA ACCCCTTCTG CATCGGCGCG GAATCGACGC TGGAGATCGG CGATCCGATC CACATGACGC TGGCCAACTA CACGATGCCG GGCGAGACCG CGCCCAATGT CGAATATATC TGCGCCAAGA TCCCCGAGCG GCTGATCTCG TGGGAGCTGC TCGACAACCC CGTCTGGCCC TATCCGGCGC GGCGCGACCA GATCATCGAG GCGACCGGCC CCGAAAGCTG CCGCTACTGG TCGACCGACG CCTTTTTCGG GCCGAACGGC ATCCACGTCA TGCGCTTCTG CGGCCCCTGG GTGAAGCGCG CCTTCGACGA CACCGCGCGC GGCCTGAAGG CGCGGGCCGA GGCGATCCAC GCGGCCCGGA AGGCGGCGGC GTGA
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Protein sequence | MTDALNLPDY PADTTVRSEV VTIDAPAALV WEVLTDLPNY GKWNPFCIGA ESTLEIGDPI HMTLANYTMP GETAPNVEYI CAKIPERLIS WELLDNPVWP YPARRDQIIE ATGPESCRYW STDAFFGPNG IHVMRFCGPW VKRAFDDTAR GLKARAEAIH AARKAAA
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