Gene Swit_3320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3320 
Symbol 
ID5197645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3653283 
End bp3653681 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content69% 
IMG OID640582865 
Productdehydratase 
Protein accessionYP_001263804 
Protein GI148556222 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.190665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000697318 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGACCG TGACCGTGGG GCAGGCCCTG CCCGAACTGA TCGTGCCGAT CACCGCCTCC 
GCCATCGTCG CGGCCGCGAT CGCCACCAAC GACTATGAGG ACGTCCATCA CGACAAGGCC
GCCGCGCAGG CGACCGGGGT GCCCGACATC TTCATGAACA TCCTGACCAG CAACGGCTTC
GTCCAGCGCT ACGTGTCCGA CTGGTGCGGG CCCGAGGCGC GGATCGCCGC GGTCGACATC
CGGCTCGGCG CGCCCAACTT CGTCGGCGAC ACGATGCGGA TCACCGGGGC GGTGAGCCGG
GTCGAGGGCG ACGAGGTCGA CGTGCGGGTC AGCGGCCGCA ACGCGATCGG TGAGCATGTC
GCCGCCACCG TCACGCTGCA TTGGAGGGCG AGGGCATGA
 
Protein sequence
MKTVTVGQAL PELIVPITAS AIVAAAIATN DYEDVHHDKA AAQATGVPDI FMNILTSNGF 
VQRYVSDWCG PEARIAAVDI RLGAPNFVGD TMRITGAVSR VEGDEVDVRV SGRNAIGEHV
AATVTLHWRA RA