Gene Swit_3295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3295 
Symbol 
ID5196264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3624476 
End bp3624844 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content67% 
IMG OID640582840 
Productnuclear transport factor 2 
Protein accessionYP_001263779 
Protein GI148556197 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.168461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCC CAGACCAGAT GGTTCGCGCC GTACAGAGCT ATGTCGAGGC GTTCGACAAG 
GGCGACCCCG AGATGGTGGT CGCCCTGTTC GCGGCCGACG CGACGGTCGA GGACCCGGTC
GGCACCCCGC CGCATGTCGG CCATGACGCG ATCCGCGCCT TCTACACGAG GTCGATGCAG
ACCGGGGCCA GGCTCCACCT CGACGGGCCG GTGCGCGTCG CCGGCGACAC CGCCGCCTTC
GCCTTCCATG TCGGCTTCGC CAAGCCCGGC ATGCAGGTCG ACGTGATCGA CCTGTTCCGG
TTCGGCGCCG ACGGCAAGGT CGTATCGATG CAGGCCTTTT TCGGCCCCAC CAACATGAAG
GGATTCTGA
 
Protein sequence
MTSPDQMVRA VQSYVEAFDK GDPEMVVALF AADATVEDPV GTPPHVGHDA IRAFYTRSMQ 
TGARLHLDGP VRVAGDTAAF AFHVGFAKPG MQVDVIDLFR FGADGKVVSM QAFFGPTNMK
GF