Gene Swit_3292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3292 
Symbol 
ID5198546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3622036 
End bp3623124 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content67% 
IMG OID640582837 
Producthypothetical protein 
Protein accessionYP_001263776 
Protein GI148556194 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.207789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG CCGACCGGGA GGCGCCGGGC GAGGCCTGGC GCCAATTCTG TCGCCGGCTC 
GAAAAGGCCG GCGACCTCGT CTTCGACGCC GAGGTGGCCG GAACGCCGAT CGACCAGGTC
GAGGGCTATC GCTATCTCTC GCGCCTGCTG CGCATCGCGC TCGACATGCA CATGGAGAAT
GCCGACCCCG ATTTCCCCGG CTTCTACCAG GCGTCGCACC CGACCGCGAA GATCGGCGCC
GACAATCCCG ACAATCTCTA CCTCAACGCC TCGATCAGCG GCGCGCGGCG CTACCGCATC
ACCGGCCGGC GCGGCAGCGT GCCGATCCTG AGCTTCGGGT CGAAGGCGAA CCGCTATGCG
GTCGACGGGA CGATGGCGTC GACCGGCGAG CTCGACGCCG CCGACATCCG GTTCGAGCCG
GACGGCAGCT TCGAGATCAT CGCGTCGAAG GAGAGGGCGA ACGGCAACTG GCTGCCGCTG
GCCGACGACA GCTCGATGCT GCTGGTCCGG CAGACCTTCC TCGACCGCGA CAGCGAAGTG
CCGGCGACGG TGAGGATCGA GGCGATCGAT GCCCCCCGCG CGACGCCCGA GCCGCTGACG
CTCGGCAAGC TCGAACAGGG TTTCGACAGG GCGGTCGCCT TCGTCGAGGG GACCGCCAGG
ACCTTCCTCC ACTGGGCGGA CCTGTTCAAG GCCGAGCAGC TCAACCGGCT CGCCACCACC
GACCAGACGA TGTTCTTCAA GGCCGGCGGC GATCCGACGA TCCACTATCT GCACGGCTAT
TGGAAGCTGG CCCCCGGCGA GGCGCTGGTG ATCGAGACGC CGGTGCCCGA CTGCACCTTC
TGGAACTTCC AGCTCGACAA TATCTGGATG GAGTCGCTCG ATTACCGTTT CCACCGGATC
CATGTGAACA AGCATGGCGC GCGGACCAAT GCCGACGGAT CGGTGACGAT CGTCGTCGCC
GCGCGCGACC CCGGCTACGG CAACTGGATC GACACGGCGG GACATGACCA TGGCACGATG
CTGCTGCGCT GGACCGGCGC GACCGAGCAT CCCGTGCCGC AGACGAAGGT GGTGAAGATC
GATGGCTAG
 
Protein sequence
MSGADREAPG EAWRQFCRRL EKAGDLVFDA EVAGTPIDQV EGYRYLSRLL RIALDMHMEN 
ADPDFPGFYQ ASHPTAKIGA DNPDNLYLNA SISGARRYRI TGRRGSVPIL SFGSKANRYA
VDGTMASTGE LDAADIRFEP DGSFEIIASK ERANGNWLPL ADDSSMLLVR QTFLDRDSEV
PATVRIEAID APRATPEPLT LGKLEQGFDR AVAFVEGTAR TFLHWADLFK AEQLNRLATT
DQTMFFKAGG DPTIHYLHGY WKLAPGEALV IETPVPDCTF WNFQLDNIWM ESLDYRFHRI
HVNKHGARTN ADGSVTIVVA ARDPGYGNWI DTAGHDHGTM LLRWTGATEH PVPQTKVVKI
DG