| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3279 |
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| Symbol | |
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| ID | 5199855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3609042 |
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| End bp | 3609809 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640582824 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001263763 |
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| Protein GI | 148556181 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.218864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCTGA TGCGCCGGCT CGAAGGCAAG GTCGCCGTCG TCGCCGGGGC CGGCGGCATC
GGCACCGCCA CCGCGCGCCG GCTGGCGCAG GAGGGCGGAT CGGTGCTGCT CGGCGATCTC
GACGGCGATG CGGCGATCGC CGCCGCGCGG GCGATCGCGG CCGAGGGCGG CCATGTCACC
GGCTTCGGCT ACGACCAGGC CGACGACGCC TCGGTCGCCC GGCTGGTCGC CGCCGCCGTC
GAGACCCATG GCCGGCTCGA CTTCATCCAC GCCAACGCCG CGAACATGGT GGCGATCCGC
GAGGACGGCG ACGCGCTCAC CATCCCGCTC GACGTCTTCG ACGCGACCGT CGCGGTCAAC
ATGCGCGGGG TGCTGTCCTG CGCCCGCCAC GCGCTGCCGC ACCTCGTCGC CAATCGCGGC
GCCTTCGTCG TCACCTCCTC CTCCGCCGCG CATATGGGCG AGCCCGAGCG GGTCGCCTAT
GCGATGACCA AGGCGGCGGT GAACGCGCTG GTCCGCCACA TCGCCAGCCG CTGGGGCAAG
GAGGGGGTGC GCGCCAACGC CATCGCCCCC GGCATGGTGC TGACCGACCA GATCAAGCGA
TCGATGCCGC TCGCCTTCCA GGAACAGGTC CTCGCCGCGC ACCGCCACTG GCGGCTGGGC
GAGAGCGAGG ACATCGCCGC GATGGTGGCG ATGCTGTTCT CCGCCGACGG CGAGTGGATC
AACGGCCAGG TGCTGGCGGT CGACGGCGGC GCGTCGATCC GGCCCTGA
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| Protein sequence | MGLMRRLEGK VAVVAGAGGI GTATARRLAQ EGGSVLLGDL DGDAAIAAAR AIAAEGGHVT
GFGYDQADDA SVARLVAAAV ETHGRLDFIH ANAANMVAIR EDGDALTIPL DVFDATVAVN
MRGVLSCARH ALPHLVANRG AFVVTSSSAA HMGEPERVAY AMTKAAVNAL VRHIASRWGK
EGVRANAIAP GMVLTDQIKR SMPLAFQEQV LAAHRHWRLG ESEDIAAMVA MLFSADGEWI
NGQVLAVDGG ASIRP
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