Gene Swit_3277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3277 
Symbol 
ID5199853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3607524 
End bp3608417 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content63% 
IMG OID640582822 
Producthypothetical protein 
Protein accessionYP_001263761 
Protein GI148556179 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG5031] Uncharacterized protein involved in ubiquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.625674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.209771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACG ACATCGCCTC GAAGGTCAGC GACGCCGACT TCGCCTATTA CAACGCCAGC 
GACATCCAAT ATACGACGCG GAGCTCGACG CTGATCAGCT CCTCGCCCTA TCTCAACCAT
GGCGAGCTGC GCGTGCTGAT CGCGCAGGAG ATGCTACGCC GGAACGGGCC CGACCTGCCC
AACACCGCCT TCATCCCCAA TGTCGTCAAG ATCCTGATGG AGCTCGAGGA CTGGCCGCGC
ATCTTCCAGC TGTTCGAGGA GGAGAAGGCG CGCCTGCCCG CGTTCAAGGC CTGGCTCGAA
GGCCGCAAGG TCTCACTGTT CACCACCGAG GAGCTGAAGG GCGCCGAGCC CGGCACGCTG
CGCGCGGTGA TCTACGACTT CGTCGTCCAC AGCGGCTACA ACATGGACCA TTTCTACCAG
GGGATGGAGA TCAAGACCGA CTTCGACTTC TACATGAAGG AGCGGACCCA TACCCACGAC
ATCGAGCACA TGATCACCGG CTTCGAGACC AACCATGCCG GGGAGGTCGC GCTGCTCGCC
GCCAATGCGC GCGCGCTCTA TCAATATTTC CGGCCCGAGC TGGCGGCCTT CTTCAACCGG
GTCAGCGCCT ATCTGAAGGC GAAGACGACG ATGAAGAGCG GCCTGTTCTA CCCGGAGGCG
TTCAAGGTCG AGCTCGACGC CGAGGATATC GGCGCGGCGC AGGGCCGGGC GTGGAAGCAC
CCGCTCTTCC TGATCCCCTA TCGCGACTAT CTCGACTGGA AGGTCAGCGA CATCCGCGAG
GAATATGGCA TCACCAACCC GCCGCCGCCC GGCGAGTGGG CCTGGACGAC CGCCGTCAGC
GAGGATCCGC GCATCGCCAA TGACGACCAG GCGATGGCGA CCGCCGCCGA GTAG
 
Protein sequence
MDNDIASKVS DADFAYYNAS DIQYTTRSST LISSSPYLNH GELRVLIAQE MLRRNGPDLP 
NTAFIPNVVK ILMELEDWPR IFQLFEEEKA RLPAFKAWLE GRKVSLFTTE ELKGAEPGTL
RAVIYDFVVH SGYNMDHFYQ GMEIKTDFDF YMKERTHTHD IEHMITGFET NHAGEVALLA
ANARALYQYF RPELAAFFNR VSAYLKAKTT MKSGLFYPEA FKVELDAEDI GAAQGRAWKH
PLFLIPYRDY LDWKVSDIRE EYGITNPPPP GEWAWTTAVS EDPRIANDDQ AMATAAE