| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3256 |
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| Symbol | |
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| ID | 5197048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3584104 |
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| End bp | 3586296 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640582801 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001263740 |
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| Protein GI | 148556158 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000366625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000730384 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGACAG CACGCAATCC GATGCAGGGC TGGGTGAAGC TGGCGCTGCT CGCCGGAACC
ATGCTCGCGC CGGCCGCCGC CATGGCCCAG GGCGCCGACG ACGAAATCGT CGTCACCGCC
CAGAAGCGCG AGCAGAAGCT GCAGGACATC GGCCTGTCGG TCACCGCGAT CGGCGGCGCC
ATGCTCGATT CGGTCGGCCG CCAGGACATG ACCGCGCTCG CCGCGCAGGT CCCCGGCCTC
CAGGTCGCCC AGTACAGCCC GACGATCACC GTCTTCAACA TCCGCGGCGT GTCGCAGAAC
GACTTCGCCG ACTCGCAGGA GGCGCCGATC GCCTTCTACA ATGACGAGGT CTATGTCAGC
GCGCTCGGCG CGATCAGCGG CCAGATGTTC GACCTCGAGC GCGTCGAGAT CCTGCGCGGG
CCGCAGGGCA CACTGTTCGG GCGCAACGCC ACCGGCGGCC TCGTCCAGGT GATCACCAAG
CGCCCGACCC GCGAGCTCGA AGGCTATGCG CAGCTCACCG TCGGCAGCTA TGGCCAGATC
GCGACCGAGG GCGCGATCAG CGGCCCGCTG AGCGAGCGGG TCCGCGCCCG CCTGTCGTTC
ACCAGCGACC ATCATGGCGG CTATATCGAG AACCGGATCG GCCGCGACAT CGGCAATGCC
CGCTTCTATG GCGGCCGCCT GCAGATCGAG GCCGACGTCG GCGACAGCGG CACCCTGCTC
GTCAAGCTGC AAGGCCTGCG CAACGACCAT GAGACGAGCG GCGGCCTCTA CAGCCATGTC
GCCGCCGGCT TCGACGCCGA CGGCCTGGGC TTCAAGCTCG GCCCGAACGA CGACTTCTGG
GGCACCTGCG GCGGCTGCGA CGCGTTCGGC TACAAGGAGC CCGACAACGA CCCCTTCACC
GGCTCGTTCG ACCGGATCGG CTTCTTCGAC CGCAAATATT GGAGCGCCAC GGTCCGCTAC
GAGCAGGACT TCGGCGGCGC CAAGCTGACC TCGATCACCG ATTACCAGGA CCTCAGGAAG
CGCTTCGGCG AGGATTCGGA CATGTCGCCG GTCCACATCT TCCACTATGA CACCGCGCAG
GACCTCTACC AGCTCTCGCA GGAGCTGCGC CTGTCGGGCG ACACCGATCG CTTCACCTGG
CTGGCCGGCA TCTACGGCCT CAAGATCCGC ACCGACAACG ACTATCAGAT CGACGCCGCG
CCGGTGCTCG GCCTGCTGGA GAATTATGGC GGGCGGCAGA AGACCGATTC AGTCGCGCTG
TTCGGGCAGG TCGAGTACAA GGCCACCGAC CAGATCAGCC TGACCGTCGG CGGCCGCTAC
AGCTGGGACC GCAAGACCTA CGACTTCGCC CATGCCGAGA ACGGCGTGCA GGACTTCGTC
TTCAACCGGA CGACCAACCC CGGCCTCGCC AAGCAGACCT TCAAGAACTG GTCGGGCAAG
GTCCAGGTCG ACTATCGCCC GACCGACGAC GTGCTGCTCT ATGCCGGCGT CAACCGCGGC
ACCAAGAGCG GCGGCTTCGG CGTGCAGGCG TTCACGCCGA TCGACCCGAC CACCCTGCCC
TACGACCAGG AAGTGCTGAC CAACTACGAA GCCGGGTTCA AGCTGACCCT GCTCGACCGC
AAGGTCACCT TCAACGGCGC GGTCTTCCAC TACGACTATA AGGACTATCA GGCCTTCACC
CTGCAGGGCC TGTCGCAGAT CGTCGCCAAC GTCCCCGCGC GGGTGACCGG CGTCGAGACC
GAGCTGGTGC TGCGCCCGGC GCGCGGCCTG ATGCTGTCGG GCTTCCTGAC CTGGCTCGAC
ACCAAGGTGA AGGGCATCAC CCTGCCGAGC GGCCGCGTCG CCGACCGCGA CATGCCGCAG
GCGCCGAAAT GGAGCATCGG CGGCATGGCG CGCTACGCCT TCCCGGTCGG CCCGGGCCAG
CTCGCGCTGC AGACCGACTG GAAATACGAC TCCTCGCTCT ATTTCTCGAC GTTCAACGCG
CCGATCGACC GCGAGCCGTC GCGCATCGTC GGCAATGCCC GCATCTCCTG GTCGTCGGAC
GACGACCACT GGACGCTGGC GGCGTTCGCG AACAACCTGA CCGACAAGAA ATACCGGATC
TACAATCTCG ACCTGAGCGC GTCGTTCGGT TTCGCCAACC AGGCCTATGC GCGTCCGCGC
TGGTTCGGCG GCAGCGTCGG CTATAATTTC TGA
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| Protein sequence | MKTARNPMQG WVKLALLAGT MLAPAAAMAQ GADDEIVVTA QKREQKLQDI GLSVTAIGGA
MLDSVGRQDM TALAAQVPGL QVAQYSPTIT VFNIRGVSQN DFADSQEAPI AFYNDEVYVS
ALGAISGQMF DLERVEILRG PQGTLFGRNA TGGLVQVITK RPTRELEGYA QLTVGSYGQI
ATEGAISGPL SERVRARLSF TSDHHGGYIE NRIGRDIGNA RFYGGRLQIE ADVGDSGTLL
VKLQGLRNDH ETSGGLYSHV AAGFDADGLG FKLGPNDDFW GTCGGCDAFG YKEPDNDPFT
GSFDRIGFFD RKYWSATVRY EQDFGGAKLT SITDYQDLRK RFGEDSDMSP VHIFHYDTAQ
DLYQLSQELR LSGDTDRFTW LAGIYGLKIR TDNDYQIDAA PVLGLLENYG GRQKTDSVAL
FGQVEYKATD QISLTVGGRY SWDRKTYDFA HAENGVQDFV FNRTTNPGLA KQTFKNWSGK
VQVDYRPTDD VLLYAGVNRG TKSGGFGVQA FTPIDPTTLP YDQEVLTNYE AGFKLTLLDR
KVTFNGAVFH YDYKDYQAFT LQGLSQIVAN VPARVTGVET ELVLRPARGL MLSGFLTWLD
TKVKGITLPS GRVADRDMPQ APKWSIGGMA RYAFPVGPGQ LALQTDWKYD SSLYFSTFNA
PIDREPSRIV GNARISWSSD DDHWTLAAFA NNLTDKKYRI YNLDLSASFG FANQAYARPR
WFGGSVGYNF
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