| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3251 |
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| Symbol | |
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| ID | 5196883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3580852 |
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| End bp | 3581355 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582796 |
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| Product | amine dehydrogenase |
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| Protein accession | YP_001263735 |
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| Protein GI | 148556153 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02659] methylamine dehydrogenase light chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0519342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00250111 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCAGGC TGGACAGGAT CATGGAGCGG ATGAGCCGCT CCACCGCGCG CGGCATCTCG
CGCCGGAGCT TCTTCGGACG CGCGACCGCC TTCGGCTTCG CGGCGGCGAT GCCCCTCCTG
CCCGTGTCGC GCGCCAATGC GGCGCAGCAG CCGGGCGAGA CGGGCGATCC GCAGTCGTGC
GACTATTGGC GCTACTGCGC GATCGACGGC TTCCTCTGCT CCTGCTGCGG CGGCAGCACC
TCGTCCTGCC CGCCGGGCAC CGAGCCGTCG CCGATCACCT GGGTCGGCAC CTGCCGCAAC
CCGGCCGACG GCAAGGATTA TGTGATCAGC TACAACGACT GCTGCGGCAA GTCGGGCTGC
GGCCGCTGCA TGTGCAACCG CAACGAGGGC GACAAGCCGA TCCACCAGCC GTCGGGATCG
AACGACATCA ACTGGTGCCT CGGCACCCAG GTCGGCATGA TCTACAACTG CTCGACCGCG
GTCGTGCTCG GCGCCGCCGA CTGA
|
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| Protein sequence | MTRLDRIMER MSRSTARGIS RRSFFGRATA FGFAAAMPLL PVSRANAAQQ PGETGDPQSC
DYWRYCAIDG FLCSCCGGST SSCPPGTEPS PITWVGTCRN PADGKDYVIS YNDCCGKSGC
GRCMCNRNEG DKPIHQPSGS NDINWCLGTQ VGMIYNCSTA VVLGAAD
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