Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3250 |
Symbol | |
ID | 5196882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3580369 |
End bp | 3580842 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640582795 |
Product | hypothetical protein |
Protein accession | YP_001263734 |
Protein GI | 148556152 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.164477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00236318 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTCCGC GTCTCCTCCT CGCCGCATCC CTGACGTGCG CCACGGTCCT CGCCGTGGCG CATGCCGGCG CGTCGGCGCC GGGCGGCAAG GCGCCGAACA TGGCGAGCAA CGGCCGCCAG CCCCACGTCA ACTACATGAC CGAATGCCAG GGCTGCCACA TGCCCGACGG CCGCGGCATC GCCGGCCGGG TGCCGGCGAT GAAGGGGGAG CTGTACCGCT TCCTCGACGT CGACGGCGGG CGCGCCTTCC TGGTCCAGGT GCCCGGTTCG GCCAATTCGA AGCTCAGCGA CGCCGACCTG TCGGCGCTGC TCAACTGGCT GATCCCGGCG ATGGGCGGCC CGGCCAAGGG CGGCTTCACC CCCTATACGC CGCAGGAAGT CGCCGCCTAT CGCGGCAAGC GGATGGTCGA CGTCGTCGGC ACCCGCGCCA ACCTGATCGC CCGCTTCCCG GCCGAGACGT CCGGGACGAA CTGA
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Protein sequence | MRPRLLLAAS LTCATVLAVA HAGASAPGGK APNMASNGRQ PHVNYMTECQ GCHMPDGRGI AGRVPAMKGE LYRFLDVDGG RAFLVQVPGS ANSKLSDADL SALLNWLIPA MGGPAKGGFT PYTPQEVAAY RGKRMVDVVG TRANLIARFP AETSGTN
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