Gene Swit_3250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3250 
Symbol 
ID5196882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3580369 
End bp3580842 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content72% 
IMG OID640582795 
Producthypothetical protein 
Protein accessionYP_001263734 
Protein GI148556152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.164477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00236318 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTCCGC GTCTCCTCCT CGCCGCATCC CTGACGTGCG CCACGGTCCT CGCCGTGGCG 
CATGCCGGCG CGTCGGCGCC GGGCGGCAAG GCGCCGAACA TGGCGAGCAA CGGCCGCCAG
CCCCACGTCA ACTACATGAC CGAATGCCAG GGCTGCCACA TGCCCGACGG CCGCGGCATC
GCCGGCCGGG TGCCGGCGAT GAAGGGGGAG CTGTACCGCT TCCTCGACGT CGACGGCGGG
CGCGCCTTCC TGGTCCAGGT GCCCGGTTCG GCCAATTCGA AGCTCAGCGA CGCCGACCTG
TCGGCGCTGC TCAACTGGCT GATCCCGGCG ATGGGCGGCC CGGCCAAGGG CGGCTTCACC
CCCTATACGC CGCAGGAAGT CGCCGCCTAT CGCGGCAAGC GGATGGTCGA CGTCGTCGGC
ACCCGCGCCA ACCTGATCGC CCGCTTCCCG GCCGAGACGT CCGGGACGAA CTGA
 
Protein sequence
MRPRLLLAAS LTCATVLAVA HAGASAPGGK APNMASNGRQ PHVNYMTECQ GCHMPDGRGI 
AGRVPAMKGE LYRFLDVDGG RAFLVQVPGS ANSKLSDADL SALLNWLIPA MGGPAKGGFT
PYTPQEVAAY RGKRMVDVVG TRANLIARFP AETSGTN