| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3228 |
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| Symbol | |
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| ID | 5196938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3547727 |
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| End bp | 3549610 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582773 |
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| Product | peptidase S15 |
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| Protein accession | YP_001263712 |
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| Protein GI | 148556130 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2936] Predicted acyl esterases |
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| TIGRFAM ID | [TIGR00976] putative hydrolase, CocE/NonD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.46374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC GACATATTCT CGGCGCGGTG ACGCTTGTCG CATTTGCCAC CGTCGCGGCC
GCCCAGACCC CGCCGATGAC CCCCGACATC CCGCCCAAGG GGTTCGACGC GGTGACGCCG
CAGGCCGACT ATGTCCGGCG CGAGGTGATG ATCCCGATGC GCGACGGCAA GAAGCTGTTC
ACCGTCATCG TCATGCGCAA GGGCACCAAC AACGCGCCGA TCCTGCTGAC CCGCACCCCC
TATAACGCCG CCAAGACCAC CAGCCGCAAC CCGAGCCAGA GGATCGAGGA GATATTGCCG
GTCGCCGATG CCGAGTTCGT CGACGACGGT TATATCCGCG TCTACCAAGA CGTGCGCGGG
CGCAACGGGT CCGAGGGCGA CTATGTGATG AACCGGCCGC TGCGCGGGCC GCTCAACCAC
ACGAAGGTCG ACCATGCGAC CGACGCCTGG GACACGATCG ACTGGCTGGT GAAGAACCTG
CCCGAGAGCA ACGGGCGGGT CGGGATGACC GGCTCCTCCT ATCCGGGCTT CACCACGCTG
ATGGCGACGA TCGACCCGCA TCCGGCGCTG CGCGCGGTGG TGCCGATGAG CCCGATGGTC
GACGGCTGGA TGGGCGACGA TTGGTTCCAC AACGGCGCCT TCCGCCAGAA CAGCTATGAT
TATCTGACCG GGCAGATGGC GTCGAAGGAC GACGGCGATC CGGTCGCGTC GGGCACCGGC
GATCGCTATG CGCTGTGGCT GAAGGCGGGG TCGGCGGGCG ACTATGCCCG CGCCTATGGG
CTCGACGCCT TCCCGGTCGC GCGCAAGATG GCCGAGCATC CCGCCTATGA CGATTATTGG
CGCGAGCAAG CGGTCGACAG GCTGCTCGCC GCGCGGCCCT TCACCGTGCC GATGATGCTC
GTCGTCGGGC AGTGGGACCA GGAGGACAGC TATGGCGCGC CGGCGGTCTA TCGCGCGCTG
AAGCCGAAGG ACAAGGACGG GCGGCTCCAC CTCGTCGTCG GGCCCTGGCG GCACAGCGGG
GTCAATTATG ACGGCTCCGC GCTCGGCCCG CTGCGCTTCA CCGGCGACAC CGCGCTGCAA
TTCCGCCGCG ACGTGATGAA GCCTTTCCTC GACCAGTATC TCAAGGGCGG CGCGCCGCGC
GTCTCGATCG CGCCGGTGCT GACCTATGAC AGCGGGCGCA ACCGCTGGCA GGCGAGCGCG
GCGATCTTCG ACACCAAGCT GAAGCCGCTC TACCTCCAGG CCGGGGCGGC GCTCGACTGG
AACCGCGCCG ATGCGGCCGG CAAGGACGAC TATGTCTCCG ACCCCGCCAA GCCGGTGCCC
TTCCTGCCGC GCCCGATCGA CTGGGACAGC GCCGACGTCT GGAAGCCCTG GCTGGTCGCC
GACCAGCGCT TCGCCGACGG CCGGCCCGAC GTGCTGACCT ATGTCACCGA GCCGCTGGCC
GCGCCGGTCC ACATCCTCGG CCGGCCGATG GTCGACCTGT TCGCCGCGAC CAGCGGCACC
GACAGCGACT GGGTGGTCAA GCTGATCGAC GTCTATCCCG ACGAGATGAG CGCCGAGCCC
AGGCTGGCCG GCTACCAGCT CGGCATCGGC ATGGAGATCT TCCGGGGCCG CTATGTCGAC
GGCTTCGACA AGCCGCGCGC GCTCGAGCCC GGCAAGGCGG AGCATTACCG GTTCGAACTG
CCGACCGTGA ACCACAGCTT CATGCCCGGC CACCGCATCA TGGTGCAGGT CCAGTCGAGC
TGGTTCCCGC TCTACGATCG CAACCCGCAA AGCTATGTCG CGAACATCTT CGACGCGAAG
CCGGGCGATT ATCGCAAGGC GACCCAGAGC ATCCTGACCG GCGGCGCCAC CGCCAGCGCG
ATCCTGCTGC CGGTGGTCGA CTGA
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| Protein sequence | MTKRHILGAV TLVAFATVAA AQTPPMTPDI PPKGFDAVTP QADYVRREVM IPMRDGKKLF
TVIVMRKGTN NAPILLTRTP YNAAKTTSRN PSQRIEEILP VADAEFVDDG YIRVYQDVRG
RNGSEGDYVM NRPLRGPLNH TKVDHATDAW DTIDWLVKNL PESNGRVGMT GSSYPGFTTL
MATIDPHPAL RAVVPMSPMV DGWMGDDWFH NGAFRQNSYD YLTGQMASKD DGDPVASGTG
DRYALWLKAG SAGDYARAYG LDAFPVARKM AEHPAYDDYW REQAVDRLLA ARPFTVPMML
VVGQWDQEDS YGAPAVYRAL KPKDKDGRLH LVVGPWRHSG VNYDGSALGP LRFTGDTALQ
FRRDVMKPFL DQYLKGGAPR VSIAPVLTYD SGRNRWQASA AIFDTKLKPL YLQAGAALDW
NRADAAGKDD YVSDPAKPVP FLPRPIDWDS ADVWKPWLVA DQRFADGRPD VLTYVTEPLA
APVHILGRPM VDLFAATSGT DSDWVVKLID VYPDEMSAEP RLAGYQLGIG MEIFRGRYVD
GFDKPRALEP GKAEHYRFEL PTVNHSFMPG HRIMVQVQSS WFPLYDRNPQ SYVANIFDAK
PGDYRKATQS ILTGGATASA ILLPVVD
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