Gene Swit_3188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3188 
Symbol 
ID5198065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3497665 
End bp3498291 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content70% 
IMG OID640582734 
Productresponse regulator receiver protein 
Protein accessionYP_001263673 
Protein GI148556091 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC GGCGGATCAT CCATATCGTC GATGACGAGG CGATCGTGCG CGCCTCGATC 
GTCAGCCTCG TGCAGGCGCA CGGCCCGTTC GAATGCCGCG AATATGCCGA TGGAGAGGCG
TGCCTCGCCG TGATCGACGC CATCGAGCCG GGATGCGTGG TGCTCGACCT TCAGCTCGAC
GAGGTCGGTG GGTCGAAGCT GATCCGCGCC CTCGCCGAGC GGCAGGACCG GTTCCGGATG
GTCGTCGTCA CCGGCCTCAG CGATCTCGCC ACCGCGATCG AGGCATTCCG CCTCGGCGCG
GTCGACTTCC TCCACAAGCC CTATGAGATG CGCGCGCTGC TCGACGCGAT CGACCGGGGC
TTCCACCTGC TCGAACAAGG CGGCGAGCCG CCTGCGCTGG TGGCCGAGGC GAGGGCGAGG
CTCGCGCGCC TCACGCCGGA CGAAGCCAGG GTGCTGGCGC TGTTGATCCA GGGCGGGACC
AACCAGGACA TCGCCCGGAT GCTGGGCGTC GATTCGCGCA AGGTGCAGAT CGATCGCGCC
CGCGCGCTGG CCGCGATCGA CGCGCCGTCG ATCCTGGCCG CGATCCGCAC CGCCGCGATC
GCCGGCTGGC CGCCCGCCGC CGGCTGA
 
Protein sequence
MTARRIIHIV DDEAIVRASI VSLVQAHGPF ECREYADGEA CLAVIDAIEP GCVVLDLQLD 
EVGGSKLIRA LAERQDRFRM VVVTGLSDLA TAIEAFRLGA VDFLHKPYEM RALLDAIDRG
FHLLEQGGEP PALVAEARAR LARLTPDEAR VLALLIQGGT NQDIARMLGV DSRKVQIDRA
RALAAIDAPS ILAAIRTAAI AGWPPAAG