Gene Swit_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3172 
Symbol 
ID5199491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3483590 
End bp3484051 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content72% 
IMG OID640582719 
Producthypothetical protein 
Protein accessionYP_001263658 
Protein GI148556076 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.972576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCA TCGTCGCCCG CATGATCCAT GTCCTCGCGG TCCTGTTCTG GATCGGCGGG 
GTCGCGTTCG TGACGCTGGT GGCGATGCCG TCGGTCCGCG CCCGCCACGA TCCGGCCGAG
CGGCTGGCGG CCTTCCACGC GCTGGAGGAC CGCTTCGCCG CGCAGGCCCG CCTCTGGGTC
CTCCTCGCCG GGGCGAGCGG GCTGTGGATG GTCTGGCGCG GCGCGATGTG GGACCGCTTC
CGCGATCCGC ATTTCTGGTG GATGCATGCG ATGGTCGCGC TGTGGGCGCT GTTCGCGGCG
ATGCTGTTCG TCATCGAGCC GCTGGTCCTC CGGCGGCGGC TGGCGGCGTC GACCGATCCG
GCCCGCGACT TCGCCCGGAT GGAGCGGATG CATCGGCTGC TGCTGGCGGC GGCGGTCGTG
ACCGTGGCCG GCGCGGTGGC GGGGAGCCAT GGATTCTACT GA
 
Protein sequence
MDGIVARMIH VLAVLFWIGG VAFVTLVAMP SVRARHDPAE RLAAFHALED RFAAQARLWV 
LLAGASGLWM VWRGAMWDRF RDPHFWWMHA MVALWALFAA MLFVIEPLVL RRRLAASTDP
ARDFARMERM HRLLLAAAVV TVAGAVAGSH GFY