| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3168 |
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| Symbol | |
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| ID | 5199487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3479644 |
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| End bp | 3480543 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582715 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001263654 |
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| Protein GI | 148556072 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.279775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.690757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCATC GACACAATCT CGCCCGCTCG CTCGTCACGC TGCTGGTCAT CCTCGTCATC
CTGGCGGGGA TCTACGCGCT GTGGCTGCGC TACCAGGTCG AGCCGGTCAC CCGCGACGGC
AAGGTGCGCG CCGACATGGT GCCGGTCGCC GCCGACGTCG CCGGCCTCGT CACCGAGGTC
CGGGTCGCCG ACAACCAGCC GGTGCGCAAG GGCGACGTGC TGTTCGTCAT CGATCGGCCG
CGCTACCGCC TCGCGCTCGA ACAGGCCGAG GCCGACCTCG CCAGCCGGCG GGTCGCGCTG
GCGCAGGCGA TCCGCGAGGA CCGGCGCAAT CGCGCGATGC CCGAGGTGAT CGCCGCCGAG
ACGATCGAGC AGGGCCGCGC GCGGGTCGAG GAGCTGCGAT CGGCGGCGGG CCAGGCGGCG
GCGGCGCGCG ACCTCGCCCG CTTCAACCTC GGCCGGACGC TGGTCCGCGC GCCGGTCGAC
GGCGTCATCT CGAACGTCTC GCTCCAGCCC GGCGTCTACC TGATGGCGGG GCGGCCCGCG
CTCGCGCTGG TCTACAACCG GTCGATGCGG GTCGAGGGCT ATTTCGAGGA GACCAAATTG
CCGGCGATCC GGGTCGGCGA TCCGGCGAGC ATCTATCTGA TGGGCGTCGC CGACGAGATC
AGGGGCCATG TCCAGAGCAT CGCCGGCGGC GTCGAGGATC GCGAGCGGGC GGGCAGCGAC
GGCCAGCTCG CCAACGTCAA CCCGACCTTC ACCTGGGTCC GGCTGGCCCA GCGCATCCCG
GTGCGGATCG CGATCGACCG CGTCCCCGCC AATGTCCGGA TGATCCCCGG CCAGACCGCC
ACCGTCGTCG TCCACCCGCG CGACGACGGG CGCAGCGTCC ACCGGAGCCT GCCATGGTGA
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| Protein sequence | MLHRHNLARS LVTLLVILVI LAGIYALWLR YQVEPVTRDG KVRADMVPVA ADVAGLVTEV
RVADNQPVRK GDVLFVIDRP RYRLALEQAE ADLASRRVAL AQAIREDRRN RAMPEVIAAE
TIEQGRARVE ELRSAAGQAA AARDLARFNL GRTLVRAPVD GVISNVSLQP GVYLMAGRPA
LALVYNRSMR VEGYFEETKL PAIRVGDPAS IYLMGVADEI RGHVQSIAGG VEDRERAGSD
GQLANVNPTF TWVRLAQRIP VRIAIDRVPA NVRMIPGQTA TVVVHPRDDG RSVHRSLPW
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