| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3159 |
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| Symbol | |
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| ID | 5198906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3472578 |
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| End bp | 3473426 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640582706 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001263645 |
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| Protein GI | 148556063 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.358465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.467321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCA GCGTCGCCCG GACCTTCCTG GAGGTCGTCA AGACCGGCAG TTTCGTCAGC
GCCGCCGCCA ACCTCAACCT CACCCAGACG GCGGTCAGCG CGCGCATCCG CGTGCTCGAG
GACCAGCTCG ACCGGCCGGT GTTCATCCGC AACAAGGCGG GGGCGAAGCT GACCCCGGCC
GGCGAGCAGT TCCTGCGCTT CGCGACGACG CTGGTGCAGG TCTGGGCGCG GGCGCAGCGC
GCCGTCGCGC TGCCGCCGGG GCGCGAGACG GTGGTGACGG TCGGCGCCGA GCTGAGCCTG
TGGAGCCCGC TGCTGCGCCA CTGGCTGCTG TGGATGCGGC GCGAATGCCC CGAGATCGCG
GTGAGCACGC AGATCGACGC GTCCGAACGG CTGATGGAGC AGGTCCAGGA GGGCTCGCTC
GACGTCGCGG TGCTCTATGC CGCGCCGAGC CGGCCGGGCG TGATCGCCGA GCTGCTGTTC
GAGGAGAAGC TGGTGCTGGT CCGCACCACG CCGACCAGCG CGCCCCTGGC CCCCGAGGAC
CATGTCCAGA TCGACTGGGG CGAGGAGTTC GCCGCCAGCT ACCAGGCGGC CTTTCCCGAC
CAGCCCAATG CGGTGGTGTC GATCGGCTAC GGCCCGCTCG CGCTCGACTA TATCCTGGCG
ACCGGCGGCA GCGGCTATTT CCGCAAGGGC TTCGTCCGCT CCTATCTGGA GGAGGGGCGG
CTCGCGCTCG TCCCCGGCAG CCCGGAATTC TCCTATTCGG CCTATGTCGT CCATTCGACC
AAGGCCGATC CCGGGGTGAT GGACCGCATC CGCGCCGGCC TGCGCGCCGC GGCGGCGATC
GCGGCATGA
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| Protein sequence | MDISVARTFL EVVKTGSFVS AAANLNLTQT AVSARIRVLE DQLDRPVFIR NKAGAKLTPA
GEQFLRFATT LVQVWARAQR AVALPPGRET VVTVGAELSL WSPLLRHWLL WMRRECPEIA
VSTQIDASER LMEQVQEGSL DVAVLYAAPS RPGVIAELLF EEKLVLVRTT PTSAPLAPED
HVQIDWGEEF AASYQAAFPD QPNAVVSIGY GPLALDYILA TGGSGYFRKG FVRSYLEEGR
LALVPGSPEF SYSAYVVHST KADPGVMDRI RAGLRAAAAI AA
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