| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3103 |
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| Symbol | |
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| ID | 5196783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3410572 |
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| End bp | 3412749 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640582651 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001263590 |
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| Protein GI | 148556008 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.105862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA CAGCGAAATG GAGTGTCGCC GGCCTGCGGA CGGGCGCGGC GCTGGCCGGG
CTGATGCTCG GCCATATGCC GGCTGCGGCC CAGACCGCCG GTTCGGCGGC GGAGGACGAG
GCGCCCGGCG AGATCGTCGT CACCGCGCAG CGGCGCTCCG AATCGCTCCA GAACGTCCCG
ATCGCGGCGG TGGCGCTGAC CGGCGCGAAC CTGGTCCAGC GCGGCGTCCA GGACATGCGC
GACCTTGCGC TGGTGTCGCC GTCGCTCAAG ATCGACACGC CGTTCGGCAA CACCGCGCCC
AAGATCACGC TGCGCGGCGT CGGATCGGGC TCCTTCAACC TCAACACCGA GACGACCGTC
GCGCTCTATG TCGACGATCT GGTGATGAAC CCGGTGTCGT CGAAGCTCGG CCAGTTGTTC
GACGTCGACC GCGTCGAGGT GCTGCGCGGC CCGCAGGGCA CGCTCTACGG CAAGAACTCG
ACCGGCGGCG CCGTCAACTA CATCACCCGC AAGCCCGACG GCACGACCGG CGCCGACGCC
AGCCTCACCG TCGCCCGCTA TGGCGAATAC AGCATCCAGG CCGGCGCGCA GACCGGGCTG
ACAGATGCGT TGTCGGTTCG CGTCGCCGTC AACCGGCGCT ATCGCGACGG CTATCAGTAC
AACAATTTCA CCGGCCGCCG GGTCAAGGAC CATGACGATT GGGGCGGACG CGTCACCCTG
CGCTACGACG GCGATAGGAT CGACGCCTCG CTCAAGCTGT TCGCGGACCG GTCGCGCACC
GACGCCTTCT TCATCAACAC CCTCGGCGTC AACGTCGACG GCTCCTCGAC CGCCGACGGC
ACCAACCCGA TCACCGGCTT CACCCCGTCG CGCGACATCG ACAGCGTCTC GTTCGACCAT
GCGCCGCGCA GCGACGTCGA CAATCGCGGC GTCGCGCTCA ACCTCGAAGC GTCGCTCGGC
GACCTGACGC TGACCAGCGT CTCGGGCTAT CTCCGCTCGA TCGGCCATAT CTCGCAGGAC
CAGGACGGCT CGCCGGTCGA CGCCGTCGCC ACCGAGTTCA ACAGCAAGGC CGACGAAGTT
TCGCAGGAGA TCCGGCTCGC GTCCGATCCC GGCCAGGCGC TGAGCTGGAT CGTCGGCGGC
AGCGCCTTCC ACCAGGACCT GCGGCTGAAC GACGCGTTCC TGCTCCCGCT GTTCGGCCTG
CCGCCGGTCG TCCTCGACAC CCGCGAGAAG ACGACCAGCC TCGCCGCCTT CGCCGACGCG
ACCTGGAAGC TCGGCGAGCG GATCAGCCTG ATCGGCGGAA TCCGCATCAC CACCGACAAG
AAGAGCTTCC ACCATGCGAC CGGCTTCAGC CTGATCGGCC CGTTCGACAT CGCGCGCAGC
CGCCGCTGGA CCGAGCCGAG CTACCGCGTC GGCATCAACT ATCAGGCGAC GCCGTCGACG
CTGCTCTACC TCTCCTATAA TCGCGGCTAT CGGTCGGGCG CCTTCGACGT CGGCTTCCCG
ACCACGACCG AGCAGTTCGA GGCCGCCAAC CCTGAATTCG TCGACGCCTT CGAGGGCGGG
ATCAAGACCG CCCTGTTCGA TCGCCGGGTG CGGATCGCCG CCGACATCTT CTACGAGATC
TTCAAGGACC AGCAGCTCCT CATCCAGCGC AGCGATCCCG GCAGCATCTG CTGCTCGCTG
GTCAATGCCG GCAAGTCGCG CATCTACGGC TTCGAGTTCG ACGGCACCGC CCGGATCGCC
AGCAATGTCG ACCTGACCGT CCAGGGATCG GTGATCCGCA GCAAATATCT CGAATTCATG
TCCGGCCCGA TCGACTATTC GGGGACGCAG CTCGCCAATG TGCCGCGCTA CCAGCTCCGC
CTCGCGCCGG AGGCGCGGCT GCCGCTGGCG TCGGGCGATG TCTTCGTCAG CCCCGACGTG
CAGTTCACCG GCCGGCAGCG CGCGGCCGAG GCCGGGGTCG ACCCCTTCGG TCGCGATATC
CAGAAGAGCT ATGTCCGCAT CAACGGACAG CTCGGCTATC GCGACGGCGA CGGTCGCTTC
AGCGCCTTCG TCTTCGTCCG CAACGCCACC AACAAGCGCA CCAAGCTCGA CTTCGCCCGG
TTCACCGCCT TCGGCTACAA CCAGGTCACC TGGTCGGAGC CGCGCAGCTG GGGCCTGACC
GTGACGGGCC GCTTCTGA
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| Protein sequence | MKRTAKWSVA GLRTGAALAG LMLGHMPAAA QTAGSAAEDE APGEIVVTAQ RRSESLQNVP
IAAVALTGAN LVQRGVQDMR DLALVSPSLK IDTPFGNTAP KITLRGVGSG SFNLNTETTV
ALYVDDLVMN PVSSKLGQLF DVDRVEVLRG PQGTLYGKNS TGGAVNYITR KPDGTTGADA
SLTVARYGEY SIQAGAQTGL TDALSVRVAV NRRYRDGYQY NNFTGRRVKD HDDWGGRVTL
RYDGDRIDAS LKLFADRSRT DAFFINTLGV NVDGSSTADG TNPITGFTPS RDIDSVSFDH
APRSDVDNRG VALNLEASLG DLTLTSVSGY LRSIGHISQD QDGSPVDAVA TEFNSKADEV
SQEIRLASDP GQALSWIVGG SAFHQDLRLN DAFLLPLFGL PPVVLDTREK TTSLAAFADA
TWKLGERISL IGGIRITTDK KSFHHATGFS LIGPFDIARS RRWTEPSYRV GINYQATPST
LLYLSYNRGY RSGAFDVGFP TTTEQFEAAN PEFVDAFEGG IKTALFDRRV RIAADIFYEI
FKDQQLLIQR SDPGSICCSL VNAGKSRIYG FEFDGTARIA SNVDLTVQGS VIRSKYLEFM
SGPIDYSGTQ LANVPRYQLR LAPEARLPLA SGDVFVSPDV QFTGRQRAAE AGVDPFGRDI
QKSYVRINGQ LGYRDGDGRF SAFVFVRNAT NKRTKLDFAR FTAFGYNQVT WSEPRSWGLT
VTGRF
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