| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3083 |
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| Symbol | |
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| ID | 5197795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3383407 |
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| End bp | 3384441 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582632 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_001263571 |
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| Protein GI | 148555989 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATG ACAACAGGCC GCAGCCGCCG CTGTGGATCG TAGAAGAAGA CGTCCGCCAG
CTCGTTTCCC TGAACGACGC CATCGATGCG CTTGCCGACG GGCTGGTCCT CGAAGCCCGC
GGCGAGGCGG GCAATGTCGA CAAGGCGCTG GGCCAGTGGA ACGCCAGCTC GATGCATGCG
CTGGGGGCGA TGATGCCGCT GCGCGGCTAT GTGGCCTTCA AGACCTGGGC GAACACGCCG
CGCGGCGCCG CGGCGGTCCT GTCGCTGTAT AGCGCCACCG ACGGCGCCCT GCTGGCGCTG
ATGGAGGCTT CGGCGATCGG GACGCTGCGC ACGGCCGCCA TATCCGGGCT GGCGACGCGG
CAACTGGCTT CGGACGACGC CGACGAGATG GCGCTGATCG GGACGGGCAT GCAATCGCCG
ATGCAGATGG CGGCGATCGC CGCCGTGCGG CCCCTCAAGC GCATCCGGGT GTTCAGCCCC
ACGCCGGAAA AGCGAAAGGC CTTCCTCGCC CGCGCCGAGG CGATGATGGG ATGCGAGATC
GTCGAGGCCG GGAGCGTCGC CGAGGCGGTC GCGGGCGCGC CGATCATCAC CCTGGCCACG
CGCGCCAGGG AGCCTTTCCT GACCACGGCG ATGGTGGACC GGGGCGCCCA TGTCAACGCG
CCGGGCGCCA TCCTGCCGGG CAATGCCGAG TTCCACCAGG ACCTGTTCGA CCGCGCCGGC
CTCGTCGTGG TCGACAACAA GCGCAATGCG GCCAAGGCTT CGCGCGAATT CGGCGAGCGC
TATGGAGCCG ATGCGGCCCG ATGGGAGGGC GTGCATACGC TGGGCGAGAT ATTGGATGCG
GGCATCAGAC GGGCCGAGGG CTCCGACGTC ACCTTGTTCA AGCCGATGGG CATGGGATTG
AGCGACCTGG CCGTCGCCGC GCTGGTCTAT GAGCGCGCTA CGGGCGCGGG GTTGGGAACG
CCCCTGCCGG TCGGAACACG CGCCGCGCCG CGTTGGACGG CCTTCGAGCA ACAACCGCAG
ACGATGGTCG GCTGA
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| Protein sequence | MSHDNRPQPP LWIVEEDVRQ LVSLNDAIDA LADGLVLEAR GEAGNVDKAL GQWNASSMHA
LGAMMPLRGY VAFKTWANTP RGAAAVLSLY SATDGALLAL MEASAIGTLR TAAISGLATR
QLASDDADEM ALIGTGMQSP MQMAAIAAVR PLKRIRVFSP TPEKRKAFLA RAEAMMGCEI
VEAGSVAEAV AGAPIITLAT RAREPFLTTA MVDRGAHVNA PGAILPGNAE FHQDLFDRAG
LVVVDNKRNA AKASREFGER YGADAARWEG VHTLGEILDA GIRRAEGSDV TLFKPMGMGL
SDLAVAALVY ERATGAGLGT PLPVGTRAAP RWTAFEQQPQ TMVG
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