| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3082 |
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| Symbol | |
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| ID | 5197794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3382613 |
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| End bp | 3383374 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640582631 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001263570 |
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| Protein GI | 148555988 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAGC GTGAAAACTA TCCTGCGCCC GTAACTAGCG ACAATCCGAT CGAAATGCGC
GCGCCACCGC TGGTGCAGCT GAAGCGGCAA TATCCGGACG ACCGAGCTAT GCAGATATCC
CACGAAGCGA TCTATCGCAG TCTCTTCATC CAGTCGCGCG GAGTGCTCAA GAAGGAGCTC
TTGGCGCATC TGCGCACGCA AAGGCAGATG CGGCTTGCCA AGGGCGCGAA GGCCGGACAT
GGCCAGGGCC AGATCGTCGA CATGATATCG ATCCGCGAGC GCCCGGCTGA GGCTGAGGAC
CGGGCCGTAC CGGGCCATTG GGAAGGCGAC CTGCTCACCG GTGCCAATGA CACATATATC
GCCACGCTGG TCGAACGGCA CACCCGTTTC GCGATGCTGG TGAAGTTACG GAGGAAGGAT
TCTGCGGCCG TCGCGGCAGC GCTCGCCCAT CAGATCTGCA AGCTGCCTGA GGAACTCCGC
CGCTCGCTGA CCTGGGACCA GGGCAAGGAG ATGGCGCGTC ATCACAGCTT CACCATGGCC
ACTGACGTCC AGGTCTACTT CTGCGATCCG CGCAGCCCCT GGCAGCGCGG CAGCAACGAA
AATACCAACG GCCTGCTCCG GCAGTATCTG CCGAGGGGCA CCGACGTCTC GCGTTTCTCA
CAAAGCCAGC TCAACGCGAT TGCGATGTGG CTCAACCAAC GTCCTCGAAA AACTCTGGAC
TTCGAAACCC CAGCTGAGAA ATTACAGGCC GTGTTGCGAT GA
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| Protein sequence | MRKRENYPAP VTSDNPIEMR APPLVQLKRQ YPDDRAMQIS HEAIYRSLFI QSRGVLKKEL
LAHLRTQRQM RLAKGAKAGH GQGQIVDMIS IRERPAEAED RAVPGHWEGD LLTGANDTYI
ATLVERHTRF AMLVKLRRKD SAAVAAALAH QICKLPEELR RSLTWDQGKE MARHHSFTMA
TDVQVYFCDP RSPWQRGSNE NTNGLLRQYL PRGTDVSRFS QSQLNAIAMW LNQRPRKTLD
FETPAEKLQA VLR
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