Gene Swit_3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3061 
Symbol 
ID5199282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3358509 
End bp3359795 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content68% 
IMG OID640582610 
Producthypothetical protein 
Protein accessionYP_001263549 
Protein GI148555967 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0232846 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAGAT ATATGAATAT ATGCACCAAT GCGGAGGAAC GAGTGGCGCG CGATCCTGAT 
ATTGCCATCA TCGGCGGCGG CATCGTCGGC CTCGCGCTCG CGATCGGGCT GCATCGGCGC
GGCGTCCGCG CGACGGTCTA TGAGGCGGCG CCCGAATTGC GCGAGATCGG CGTCGGCATC
ACCCTGCTGC CCCATGCGAT GCGCGAGCTG GCGGCGCTGG GGCTGGCCGA CGAGATTCGC
GCCTGCGGCG TCGAGACGCG GACGAGCGCC TTCTTCAACC GCTTCGGCCA GTCGATCTAC
AGCGAGCCTC GCGGGCTTGC GGCCGGCTAT GCGATCCCGG AGGTGGCGAT CGGTCGCGGC
CGGTTGCACG GGCTGCTCCA TCGCAAGGCG CTGTCGCTGC TCGGGCCGGA GCATATTCGC
GTCGACCATC AACTCGCCGG CTTCGCGCAG GACGAGGACG GCGTCACGCT CCGCTTTCGC
GGCGATGCCG GGCGGAGCGA TCGCGATCCG ATCCGGGTTG CCTTCGCGAT CGGTTGTGAC
GGCGTGAACT CGGCGGTCCG CCAAGAGCTT TATCCCGACG ACCGGGTGGT GTTCACCGGC
ATCAACACCT GGCGCGGCGT CACCCGGCGC CCGCCGATCC TCGACGGCGG CACCTATATG
CGCATCGGGT CGATCCGCAC CGGCAAGATG GTGATCTACC CGATCGAGCC GGTCGGCGCC
GACGGCACCC AACTCGTCAA CTGGGTGGCC GAGATCGAGC GGCCGACCGC GGCGCGGAAC
GACTGGAACA GGAGCGGCCG CACCGCCGAT TTCGAGCCGA TCTACGCCGA TTGGACCTAT
GACTGGCTCG ACGTCCCGCG CCTGATCCGC GGCGCCGAGC TGCTGCTCGA ATATCCGATG
GTGGACAAGG ACCCGCTCGC GCGCTGGACG TTCGGCCGGG TGACGCTGGC GGGCGACGCC
GCGCATCCCA TGTACCCCCG AGGCTCCAAC GGATCGGCGC AGGGGCTGAT CGATGCGCGC
GTCCTGGCCG ACCGGATCGC GGCGGCCGCC GACCCGCGCG ACGGCTTCGC CGCCTATGAG
GAGGAGCGGC GCCCGCCGAC CAGCCGCATC GTCGAGACCA ACCGCACATC GCCGCCCGAC
ATCATCAACA TCCGCGTCGA GGAACTGACC GGCGATCGTC CGTTCGACGA TCTCGATCGG
TTCATCAGCC AGGACGAGCT GAAGCGGCTG TCGGACCGGT ACAAGGATAT CGCCGGTTTC
TCGGTCGAGG GGTTGCGCGT CGCCTGA
 
Protein sequence
MRRYMNICTN AEERVARDPD IAIIGGGIVG LALAIGLHRR GVRATVYEAA PELREIGVGI 
TLLPHAMREL AALGLADEIR ACGVETRTSA FFNRFGQSIY SEPRGLAAGY AIPEVAIGRG
RLHGLLHRKA LSLLGPEHIR VDHQLAGFAQ DEDGVTLRFR GDAGRSDRDP IRVAFAIGCD
GVNSAVRQEL YPDDRVVFTG INTWRGVTRR PPILDGGTYM RIGSIRTGKM VIYPIEPVGA
DGTQLVNWVA EIERPTAARN DWNRSGRTAD FEPIYADWTY DWLDVPRLIR GAELLLEYPM
VDKDPLARWT FGRVTLAGDA AHPMYPRGSN GSAQGLIDAR VLADRIAAAA DPRDGFAAYE
EERRPPTSRI VETNRTSPPD IINIRVEELT GDRPFDDLDR FISQDELKRL SDRYKDIAGF
SVEGLRVA