Gene Swit_3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3019 
Symbol 
ID5200047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3305670 
End bp3306212 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content64% 
IMG OID640582568 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001263507 
Protein GI148555925 
COG category[R] General function prediction only 
COG ID[COG2514] Predicted ring-cleavage extradiol dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCGA TCAGACCTTC CCTCGCCCAT CTGGGCATAT TCGTTTCCGA CCTCGATCGG 
ATGGAGCGCT TCTATGCGGA CGTGTTCGGA CTGGTCGTCA CCGATCGCGG CGTGGGCGCC
GTCTTCAAGA ACCGGCTCGT CTTCATGAGC GGCTCGGCGG ACCAGCATCA CCAGGTGGTG
CTGTCGACCG GGCGACAGGC GGACGCGCCC AGCACGATCA TGCAGCTCTC CTTCAAGGTG
GCGTCGCTCG CCGAGCTGCG CGACGTCCAG GCACGGGCGG CGGCGCATGG GGCGACCGAG
ATGATCGGCC TGAACCATGG CAATGCCTGG TCGATCTATT TCTATGATCC CGAGATGAAC
CGCATCGAGA TCTACCTGGA TACCGATTTC CACACGCCTC AGCCCTGTGC CGATCCGCTG
GACCTCGCGA AGAGCGACGA GGAGATAGTG GCGGAGACCA GGGCGCTGGT CGAGGCGCGG
CCCGGCGGCA TGGATCGCCG GAAATATGTC GAGGCGATGC AGGGTGTGCT CGCCCGGAAC
TGA
 
Protein sequence
MPAIRPSLAH LGIFVSDLDR MERFYADVFG LVVTDRGVGA VFKNRLVFMS GSADQHHQVV 
LSTGRQADAP STIMQLSFKV ASLAELRDVQ ARAAAHGATE MIGLNHGNAW SIYFYDPEMN
RIEIYLDTDF HTPQPCADPL DLAKSDEEIV AETRALVEAR PGGMDRRKYV EAMQGVLARN