Gene Swit_3018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3018 
Symbol 
ID5200046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3304525 
End bp3305646 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content67% 
IMG OID640582567 
Productalcohol dehydrogenase 
Protein accessionYP_001263506 
Protein GI148555924 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCCGT CGAAGATGCG CGCGGCCCGC ATGTATGACG TCGGCGCGCC GATGGTCATC 
GAGGAGGTCG ACACGCCCAA GCCCGAGGCG CTCGACGTCG TCGTCAAGGT GCATGCCTGC
GGGATCGTGC CCAATCTGGG CAATGTCCTC AAGAACTGGT CGACCTGGTT CCCGCAGCTT
CCGCTTCCCC GGCTGCCCGC GACCTTCGGC CTCGATCCGG CGGGGGTGAT CGTCGAGGTC
GGCCGCCATG TCACCGGCTT GAAGGTCGGC GATCGGGTGT ACGTCAATCC TGGCCGCTCG
TGCGGAACGT GCCGTTCGTG CCGGGCCAAC AATCCCACCG GCTGCAACTC GATGATCCTG
CAGGGCTATT TCGGCTATTC GCCGACCGCG CAGGACATGT TCGACCGCTA TCCGTTCGGC
GGTTTCTGCG AATATATGCT GGCGCCGGCC AATGGCTGCG TGCTCCTGCC CGACAACGTC
ACCTTCCAGC AGGCGGCGCG GCTCGGCTAT ACCGGAACCG GCTATTCGGC GCTGCGCAAG
GGCAAGGCCG GGCCGAACGT CACGACGCTG ATCCATGGCG CGACGGGCAC GCTGGGCCTG
CCCACCGTGA TGTGTGCGCT GGCGATGGGC GTCACGCGCA TCCTGGCGGT GGCGCGCAAT
CGCGACCTGC TGGAGGAGGT GCGCAGCCTG GCGCCGCGCC GCATCTTCAC CCATTCGACC
CTCGACGGCC CCGTCCGCGA CTGGGCGATC TCGATGACCG AGGGCGAGGG CGTCGACCTG
GCGATCGACA GCGTCGGGCC GGGCGGCACC GCCGATCAGA TGCGGGACCT GCTCCGCTCG
CTCGGCCGGA CCGGGCTCCT CGTCAATGTC GGCGCGGTGG CGGAACCGGT GGCGATGAAC
GTCCACAAGA TGATGGACTG GAACCAGGGC TTCCAGGGAT CGGTCTGGTT CACCACCCCC
GAAGGGCAGG ACATGGCGGA GATGATCCGC GCCGGCACGC TCGACATGGG CGTCTTCGAC
CAGCAGGCCT ATCCGCTCGA CCGGATCAAC GACGTGCTGG CCGGGATCGA GAACCGCCAT
GGCGGCTTCT CCAACTTCAC CGTCGTCCCC AATCCCGAAT GA
 
Protein sequence
MVPSKMRAAR MYDVGAPMVI EEVDTPKPEA LDVVVKVHAC GIVPNLGNVL KNWSTWFPQL 
PLPRLPATFG LDPAGVIVEV GRHVTGLKVG DRVYVNPGRS CGTCRSCRAN NPTGCNSMIL
QGYFGYSPTA QDMFDRYPFG GFCEYMLAPA NGCVLLPDNV TFQQAARLGY TGTGYSALRK
GKAGPNVTTL IHGATGTLGL PTVMCALAMG VTRILAVARN RDLLEEVRSL APRRIFTHST
LDGPVRDWAI SMTEGEGVDL AIDSVGPGGT ADQMRDLLRS LGRTGLLVNV GAVAEPVAMN
VHKMMDWNQG FQGSVWFTTP EGQDMAEMIR AGTLDMGVFD QQAYPLDRIN DVLAGIENRH
GGFSNFTVVP NPE