Gene Swit_3015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3015 
Symbol 
ID5197243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3301038 
End bp3302138 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content71% 
IMG OID640582563 
Productpyrophosphate-dependent phosphofructokinase 
Protein accessionYP_001263503 
Protein GI148555921 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0205] 6-phosphofructokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.494016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG GCGTGCTGAC CGGCGGCGGC GACGTTCCGG GGCTCAATCC CTGCATCCGG 
TCGATCGCGC TGTCGGCGCT CGATCGCGGC TGGGAGGTGA TCGGCTTCAG GCGCGGCTGG
CAGGGCTTCC TCGAGATCGA CCCCGCCGAG CGGGAGAGCG TCGCCGCGCA CAGCATCGTG
CTCGACCGCG AGGCGGTGCG CGGGATCGAC CGGGTCGGCG GGACGATGCT CCACACCTCG
CGCACCGACC CGCGCACCGT GGCCGGCGGC GACCGCACCG GCCATGTGCT CATGGTGCTC
GACGCGCTCG GCGTCGACGC GCTGATCACG CTGGGCGGCG ACGGGACGCT GCGCTTCTCG
GCGCATCTGT CGGCGCAGGG CTTCCCGGTC GTCTCGATCC CCAAGACGAT GGACAACGAC
GTGTTCGGGA CCGACTATTG CATCGGCTTC TCGACCGCGA TCACCCGATC GGTCGACGCG
ATCAACGCGC TGCGCACCAC CGCCGAGAGC CATGAGCGGA TCGCGATCGT CGAGCTGTTC
GGGCGGCGCA GCGGGGAGAC GGCGCTGCTC GCCGGCTTCC TGGCGCAGGT CGACCGCACC
GTGATCGCCG AGGTGCCGGC CGATCCCGAC GTGCTGCTGC CGCTGCTCGC CGCCGATCGC
CGCAGCCGGC CCGGCGCCTA TGCGATGTGC GTGATCTCGG AAGGGGCGAA GCTGGCGGGC
GACGAGGCGG AGGACGGCGA TCGGCGGCTG TCGGCGACGC GGCGCAGCGA GACGGCGGTC
AGCCGGCGGC TGGCGCTGCT GATCGAGCAG CGGGCGAAGG AGGGGACGAT CGTCCAGCAG
CTCGCCTATC TGATGCGATC GGGCGATCCC GACGCGCTCG ACCGGATGGT CGGCTTCGCC
TTCGGCGGCC TCGCCGTCCA GAAGATCGAG GCGGGCGAGA CGGGCCGGAT GCTGGCGCTG
CGCGACGGCA ATTACTGTCA TGTGCCGATC GACACGCTGC TCGGCGGCAC CAAGACGGTC
GACGTCGACA GGCTCTACGA TCGCGCGCGC TACCGGCCGA AGCTCACCCA TGTCGAGGGC
ATGCCGATGT TCCTCTATTG A
 
Protein sequence
MRIGVLTGGG DVPGLNPCIR SIALSALDRG WEVIGFRRGW QGFLEIDPAE RESVAAHSIV 
LDREAVRGID RVGGTMLHTS RTDPRTVAGG DRTGHVLMVL DALGVDALIT LGGDGTLRFS
AHLSAQGFPV VSIPKTMDND VFGTDYCIGF STAITRSVDA INALRTTAES HERIAIVELF
GRRSGETALL AGFLAQVDRT VIAEVPADPD VLLPLLAADR RSRPGAYAMC VISEGAKLAG
DEAEDGDRRL SATRRSETAV SRRLALLIEQ RAKEGTIVQQ LAYLMRSGDP DALDRMVGFA
FGGLAVQKIE AGETGRMLAL RDGNYCHVPI DTLLGGTKTV DVDRLYDRAR YRPKLTHVEG
MPMFLY